PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002839.1_g300.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 313aa    MW: 34327.9 Da    PI: 5.1935
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002839.1_g300.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-174291255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               ++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae+Aa+a+++a+  l+g
  Pav_sc0002839.1_g300.1.mk 42 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEDAARAYDEAACLLRG 91
                               799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEFQFEQQNQ ICFPAAANKA VGIPMSKVGK LKGRTRSNNT NKFVGVRQRP SGRWVAEIKD  60
TTQKIRMWLG TFETAEDAAR AYDEAACLLR GSNTRTNFIT HVSLDSPLAS RIRNLLNTKK  120
GGSSKQVIEQ TSSSIADHDM NASHPPTSST TNSDKYMTSN ISTASTSTCT STSGGSDTSL  180
STEVFRDSQL FDDVYKPDLR HCNEEFELSS SASQSNLSWG GFQTGVDGFS FAQQVFDLPK  240
HQAGAAASSS TTTSTTTTAA EADSEFLEFE RMKVERQISA SLYAMNGLQE YMDTVYDPNE  300
PSWDLPPLCP LFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-31ERF family protein