PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002722.1_g040.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 473aa MW: 51534 Da PI: 7.9272

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002722.1_g040.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.5	6.2e-38	125	184	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++r vPvG+grrknk+ Pav_sc0002722.1_g040.1.mk 125 PDKVLPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRSVPVGAGRRKNKHF 184 78999*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MHVKAKAISF CGDMSKTESR SNENSNDIKL FGRTIPLLQT QIERVTCKNF QVPPKSQFMD 60 SCSELTKAEA DGPCAENSVQ AGTSAICKEE EKSRMQVNEA RVNAKTNSKQ AENRILEQKE 120 DFQKPDKVLP CPRCNSLDTK FCYFNNYNVN QPRHFCKNCQ RYWTAGGTMR SVPVGAGRRK 180 NKHFASQYHQ IIVSSDGVPS TRLETTDSIN HQLLSCGKSS TFGLPDRAGT VLKFGHEAPL 240 CESMDTVVNL RDPRTCVEIG SANGRESGDE PSCVSSVTAC GNQGSELPKN ILQRDGIGLQ 300 GSCSESNISH PFNYYPVAPL VFPWNPGWRN AASPAAPQHS QSFCVQNCTA SNQVQWYPTP 360 VLVVPGPCPQ SIPLQNVPAP YWGCMPICPA GMGNVSLSGS NGCLSPSSST SNSCCSGSGS 420 LTLGKHSRDS NIMDEEKSEN RVLVPKPLRV DDPDEASKSP IWASLGIKRD LKT

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MHVKAKAISF CGDMSKTESR SNENSNDIKL FGRTIPLLQT QIERVTCKNF QVPPKSQFMD  60
SCSELTKAEA DGPCAENSVQ AGTSAICKEE EKSRMQVNEA RVNAKTNSKQ AENRILEQKE  120
DFQKPDKVLP CPRCNSLDTK FCYFNNYNVN QPRHFCKNCQ RYWTAGGTMR SVPVGAGRRK  180
NKHFASQYHQ IIVSSDGVPS TRLETTDSIN HQLLSCGKSS TFGLPDRAGT VLKFGHEAPL  240
CESMDTVVNL RDPRTCVEIG SANGRESGDE PSCVSSVTAC GNQGSELPKN ILQRDGIGLQ  300
GSCSESNISH PFNYYPVAPL VFPWNPGWRN AASPAAPQHS QSFCVQNCTA SNQVQWYPTP  360
VLVVPGPCPQ SIPLQNVPAP YWGCMPICPA GMGNVSLSGS NGCLSPSSST SNSCCSGSGS  420
LTLGKHSRDS NIMDEEKSEN RVLVPKPLRV DDPDEASKSP IWASLGIKRD LKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	4e-43	Dof family protein