PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002433.1_g080.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 323aa MW: 36234.7 Da PI: 7.0926 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.2 | 4.4e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEde+l d+++++G g+W++ ++ g++R++k+c++rw +yl Pav_sc0002433.1_g080.1.mk 15 KGPWTTEEDEKLMDYIARHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.5 | 4.8e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+ +++++ G++ W++Ia +++ gRt++++k++w+++l Pav_sc0002433.1_g080.1.mk 68 RGKFSEDEERVIINLHSVVGNK-WSKIATHLP-GRTDNEIKNYWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MGRSPSCDEQ SGLKKGPWTT EEDEKLMDYI ARHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEDEERVII NLHSVVGNKW SKIATHLPGR TDNEIKNYWN THLRKKLLHM 120 GIDPNTHKPR TDLNHLLNLS QLLRAANVGQ MNMSSWDNAL SLRLQAGAAQ LAKMQLLQHL 180 CMQFVNSSSS AAAPPPPLPN IDMMSTFGYQ NLNQFGGQAN SLEGFEGHNT SNNNSNIPIF 240 DNNMSSYYED MLQTKNPFPA LVSASPGTSC NTNTNQMENS MSGDPAADCF STHSPTTIFE 300 AWEKLMDDET SESYWKNILE SIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 2e-87 | MYB family protein |