PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002206.1_g070.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 329aa MW: 36812.7 Da PI: 7.3402

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002206.1_g070.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.8	3.7e-08	255	289	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++ L+ +q+ +WF N+R ++ Pav_sc0002206.1_g070.1.mk 255 KWPYPSEAQKLALAESTCLDLKQINNWFINQRKRH 289 569*****************************885 PP
2	ELK	31.1	5.4e-11	209	230	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K LlrKY gyLgsLkqEF+ Pav_sc0002206.1_g070.1.mk 209 EIKAKLLRKYTGYLGSLKQEFM 230 8999*****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MERGGTNCNN NSGVTYSGLM MGFGNNTSRT GSSKAQFLSL PLMVGCSHPN LQSDHQTTDQ 60 EMMVSCSDSM KAKIMAHPLF PRLLASYVSC QKVGAPPEVV ARLEQACSTA AHNSEAACLG 120 GGDPDPALDQ FMEAYCEMLT KYEEELTKPF KEAMLFLSKI DSQLRALTVH SSSDSASSGD 180 NIVGRSGSPE EVDATMNGSC IDPRAEDREI KAKLLRKYTG YLGSLKQEFM KKKKNGKLPK 240 EARHQLLDWW SRHYKWPYPS EAQKLALAES TCLDLKQINN WFINQRKRHW KPSEDIQFAV 300 MDPTHPHHHP HFYMDNNLTF PMNSTSTPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-110	TALE family protein