PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002156.1_g120.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 520aa MW: 55656.8 Da PI: 7.8074

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002156.1_g120.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.2	1.6e-13	119	158	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ Pav_sc0002156.1_g120.1.mk 119 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCCNNVEN 158 89************************.******9875 PP
2	TCR	51.3	2.4e-16	203	242	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e Pav_sc0002156.1_g120.1.mk 203 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 242 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MGEAEGDESA PTKRQSDAAT GATTSSSSSM SDVPAKKLAR QLDFTGFGGA PASVAVPELP 60 KPQLPTVAVQ QSQPKPPVVA VPVPVPPQPP IPSVRPVKPE SPKSRPRPNV DAKDGTPKKQ 120 KQCNCKHSRC LKLYCECFAS GIYCDGCNCV NCCNNVENEG ARRDAVEATL ERNPNAFRPK 180 IASSPHGPRD TREEAGEVLI LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCIDCKN 240 FEGSEERQAL FHGDHGNNMA YLQQAANAAI TGAIGSSGYA SSPPISKKRK GQELFGPTAK 300 DPSIHRIGQF QQKAVADDCS SANEADKISP DDSNSDGADV PKGRPMSPAT LALMCDEQDT 360 MFMSAASPNG LMGDRCNTSS QLPNGQGMTE VYAEQERIVL TKFRDCLNRL ITFGEIKGKS 420 ILFLSGLNMV YLEWLFPCEK LETKCSSLAR SEAETQKEQP SNGSTNARME TGNQQGPVSN 480 GVAKPAVPLT AKTTTPHMVA ALAVSKTPSH PENGESRPKD

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MGEAEGDESA PTKRQSDAAT GATTSSSSSM SDVPAKKLAR QLDFTGFGGA PASVAVPELP  60
KPQLPTVAVQ QSQPKPPVVA VPVPVPPQPP IPSVRPVKPE SPKSRPRPNV DAKDGTPKKQ  120
KQCNCKHSRC LKLYCECFAS GIYCDGCNCV NCCNNVENEG ARRDAVEATL ERNPNAFRPK  180
IASSPHGPRD TREEAGEVLI LGKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCIDCKN  240
FEGSEERQAL FHGDHGNNMA YLQQAANAAI TGAIGSSGYA SSPPISKKRK GQELFGPTAK  300
DPSIHRIGQF QQKAVADDCS SANEADKISP DDSNSDGADV PKGRPMSPAT LALMCDEQDT  360
MFMSAASPNG LMGDRCNTSS QLPNGQGMTE VYAEQERIVL TKFRDCLNRL ITFGEIKGKS  420
ILFLSGLNMV YLEWLFPCEK LETKCSSLAR SEAETQKEQP SNGSTNARME TGNQQGPVSN  480
GVAKPAVPLT AKTTTPHMVA ALAVSKTPSH PENGESRPKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.2	1e-112	CPP family protein