PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001925.1_g140.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 268aa    MW: 30240.6 Da    PI: 8.738
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001925.1_g140.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.11.7e-322578255
                    G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                               +rlrWt+eLH+rFveav++LGG+++AtPk il++m+v gLt++h+kSHLQkYR+
  Pav_sc0001925.1_g140.1.mk 25 ERLRWTQELHDRFVEAVTKLGGPDRATPKGILKAMSVSGLTIYHIKSHLQKYRI 78
                               7****************************************************7 PP
2Myb_DNA-binding59.29.3e-192677148
                               TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                               r+rWT+e+++++v+av++lGg+   t+k I + m   g+t +++ks++qky+
  Pav_sc0001925.1_g140.1.mk 26 RLRWTQELHDRFVEAVTKLGGPdraTPKGILKAMSvSGLTIYHIKSHLQKYR 77
                               89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MLGAALIPVE FEMGPSRSDS SAGRERLRWT QELHDRFVEA VTKLGGPDRA TPKGILKAMS  60
VSGLTIYHIK SHLQKYRISK FIPESTSKGK LQKKNISEML PNFGATSGAQ LNEALKIMQI  120
QVQRRLSDQN EVQKILKHKI EAQARFLDIF SAERHNNNKN RPILITKPSK VPLPRTSLPS  180
LCEDSESNAK EFCSDSEADK IEIQSSAEQF QAQKRLRLHH QNDEVCELAL NSEWYNQSPS  240
LLLPHEDPLN FPWNLAACSS PLVPTCFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-49G2-like family protein