PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001837.1_g060.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 299aa MW: 34125.2 Da PI: 7.6579

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001837.1_g060.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.3	4.8e-30	28	87	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.....kYRl 55 kprlrWtp+LH+rFv+av++LGG+ekAtPk++l+lm++kgLtl+h+kSHLQ kYRl Pav_sc0001837.1_g060.1.mk 28 KPRLRWTPDLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQlvslqKYRL 87 79***********************************************75222227876 PP
2	Myb_DNA-binding	62.8	6.8e-20	30	78	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++q Pav_sc0001837.1_g060.1.mk 30 RLRWTPDLHDRFVDAVTKLGGPekaTPKSVLRLMGlKGLTLYHLKSHLQ 78 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MERSYGGGCD GEGNCGYENG VMMTRDPKPR LRWTPDLHDR FVDAVTKLGG PEKATPKSVL 60 RLMGLKGLTL YHLKSHLQLV SLQKYRLGQH ARKQNSGEEH TRENNRDSYV HFSHHHSTGS 120 SAKSSRGDCY AHFPYEPAWI LMNENAENRT LPFSEALKCQ IDVQNRLQEQ LEVQKKLQMR 180 IEAQGKYLQA ILEKAQKGLS LDMKGPTTIE ATRAQLTDFN LALSNFMENI NEEDRRGKSN 240 GSTFEIYEEG NTEENRDAKL KVERGFINFD LNTKGSYDYV GSNAGDFEPR RFRLQDTTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	3e-69	G2-like family protein