PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001812.1_g070.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 686aa MW: 75571.6 Da PI: 9.4183

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001812.1_g070.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	588	637	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Pav_sc0001812.1_g070.1.mk 588 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 637 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MVLQKRLDYG FNGYQVPATP RATRSARRRG AIRKRADDNS MGAFDLLATI AGKLLLEGES 60 SPASSHTSKD QRAGTKENCL DGDKPLKVEP CDQGSCDRRI PVSDHISQGP NQSSCSKESP 120 VHQNESSVMT TSNCSERFAS DMLVSGKCKN ETGSFTSKIE AGSSGCREAG EFKLDGEVKT 180 LVKDETNKSA KVLIGTGPDM CGLEDPVVWE GEPPALVSSD SSTKVPMYVD HIPQRSFPTS 240 RDDVKVVSRD DDENSSGCTH PVTSIKYSRP APSRIGDRRI RKILASKYWK VAPKLKDDIH 300 SNSCKWLPCT KRMYRDQKPN YHNRKNCYKR QRSQMNIPFK KRKLFDRSAI LNIDEGISRE 360 GFFDSRGKGI TGDASCSKMQ GAAMKSSSLA VQHSSFQSRS SHVKLRIKSF RVPELFIEIP 420 DTATVGSLKK TVMDAVTAVL GGGLCVGVLL QGKKVRDDNK TLLQTGISQD NQLDSLGFTL 480 EPNSSQTPPP LCSGDSPCML PCDVLQPLTR YPSGPTSEAS PEPHPASLGN FIESDHDSAP 540 SPTDMSAEKS TTDSKALVAV PDMSVEALAV VPGHRKSKRF DIGQRRIRRP FSVAEVEALV 600 QAVEKLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR 660 VLAAHAYWSQ QQAKQQLKQP ETCLLV

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MVLQKRLDYG FNGYQVPATP RATRSARRRG AIRKRADDNS MGAFDLLATI AGKLLLEGES  60
SPASSHTSKD QRAGTKENCL DGDKPLKVEP CDQGSCDRRI PVSDHISQGP NQSSCSKESP  120
VHQNESSVMT TSNCSERFAS DMLVSGKCKN ETGSFTSKIE AGSSGCREAG EFKLDGEVKT  180
LVKDETNKSA KVLIGTGPDM CGLEDPVVWE GEPPALVSSD SSTKVPMYVD HIPQRSFPTS  240
RDDVKVVSRD DDENSSGCTH PVTSIKYSRP APSRIGDRRI RKILASKYWK VAPKLKDDIH  300
SNSCKWLPCT KRMYRDQKPN YHNRKNCYKR QRSQMNIPFK KRKLFDRSAI LNIDEGISRE  360
GFFDSRGKGI TGDASCSKMQ GAAMKSSSLA VQHSSFQSRS SHVKLRIKSF RVPELFIEIP  420
DTATVGSLKK TVMDAVTAVL GGGLCVGVLL QGKKVRDDNK TLLQTGISQD NQLDSLGFTL  480
EPNSSQTPPP LCSGDSPCML PCDVLQPLTR YPSGPTSEAS PEPHPASLGN FIESDHDSAP  540
SPTDMSAEKS TTDSKALVAV PDMSVEALAV VPGHRKSKRF DIGQRRIRRP FSVAEVEALV  600
QAVEKLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR  660
VLAAHAYWSQ QQAKQQLKQP ETCLLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-111	MYB_related family protein