PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001807.1_g120.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 327aa MW: 35403.9 Da PI: 8.7401 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.7 | 3.1e-19 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+++G+++W++I++ ++ gR++k+c++rw + Pav_sc0001807.1_g120.1.mk 12 KGPWSPEEDDALQRLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a++++G++ W+tIar ++ gRt++ +k++w++ Pav_sc0001807.1_g120.1.mk 66 AFTPEEDDTIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 108 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MAVSRKDMDR IKGPWSPEED DALQRLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRAFTPE EDDTIIRAHA RFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSDIGVVF 120 PGGGLGGSGG YDGHFLHDHE QPPLKRSVSA GSGMPVFTGL YMSPGSPSGS DMSDSSVVPV 180 MSLSECHVYR PVARSGGVLP LAETTSSSND NNSNNEKQKE NDPTTSLSLS LPGVDSGEVS 240 NRVAATESTQ APVPIPIQNP VPDPAPARAP FQNIPVELLA VMQGMIRKEV RSYMAGLEQS 300 GICMQQAASN DGFRNVAVKR IGVSRIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 3e-88 | MYB family protein |