PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001710.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 76aa    MW: 8878.39 Da    PI: 9.9051
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001710.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-101401155
                               HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                               +RR++iN+++  L+ ++P+      +K++ +++Le+Av+Y+k Lq
  Pav_sc0001710.1_g010.1.br  1 KRREKINERLRVLQNIVPNG-----TKVDISTMLEEAVHYVKFLQ 40
                               7*****************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
KRREKINERL RVLQNIVPNG TKVDISTMLE EAVHYVKFLQ LQIKLLSSDD KWMYAPICYN  60
GMDRGLDLKL TSPKQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.31e-40bHLH family protein