PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001627.1_g180.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family VOZ
Protein Properties Length: 455aa    MW: 50444.7 Da    PI: 5.2685
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001627.1_g180.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ399.48.1e-1232074211217
                        VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaa 84 
                                pp saflgpkca+w+c+rpa  s+++q+ycss ha lalnegl+g  p+lrp+gi lkdg+l+aal+ak+qgk+vgip+cegaa
  Pav_sc0001627.1_g180.1.mk 207 PPVSAFLGPKCAFWECSRPA--SNRCQNYCSSGHALLALNEGLLGRPPILRPGGIALKDGSLLAALNAKTQGKDVGIPNCEGAA 288
                                788****************8..689*********************************************************** PP

                        VOZ  85 takspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewh 168
                                t k+pwna+elfdls+l+getirewlff kprrafesgnrkqrslpdy+grgwhesrkqvmkefgg+krsyymdpqpss  ewh
  Pav_sc0001627.1_g180.1.mk 289 TLKCPWNAPELFDLSFLDGETIREWLFFGKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGQKRSYYMDPQPSSDREWH 372
                                ************************************************************************************ PP

                        VOZ 169 lyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                l+eye+n++da+alyrlelk   +kks+kgkvs+d+ladlqkk+grlta
  Pav_sc0001627.1_g180.1.mk 373 LFEYEVNNSDACALYRLELKFGSAKKSPKGKVSSDPLADLQKKMGRLTA 421
                                ***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MLKGSKGKCE SPSHKLLKEK TKTRLEDLQG MLTNVQAAKK ESGTDDIVIL VEQANQMVRE  60
WRAELNEPSP ASSLLGGSLG SFCEEELARV LKHLDEEDDA TSPLKQLPPS MPESDLLNLH  120
SSNMLAFKEE FFVSKEPEED IFQGFDQCYT ASNLQNTMID NSDLTTQLKY HHFDFHGDLD  180
EGLFIEGNNI TQSEEDVVPN VLPDICPPVS AFLGPKCAFW ECSRPASNRC QNYCSSGHAL  240
LALNEGLLGR PPILRPGGIA LKDGSLLAAL NAKTQGKDVG IPNCEGAATL KCPWNAPELF  300
DLSFLDGETI REWLFFGKPR RAFESGNRKQ RSLPDYNGRG WHESRKQVMK EFGGQKRSYY  360
MDPQPSSDRE WHLFEYEVNN SDACALYRLE LKFGSAKKSP KGKVSSDPLA DLQKKMGRLT  420
AEVPTDDASN VKGKASTKAD AGNVFSSHNQ TTSTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-150VOZ family protein