PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001582.1_g320.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 323aa MW: 36275.3 Da PI: 5.454

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001582.1_g320.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	73.1	3.6e-23	131	191	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg +WrKYGqKe+ ++++pr+Y+rCt + C+++k+v++ +e+p++ ++tY g+H+++ Pav_sc0001582.1_g320.1.mk 131 EDGRAWRKYGQKEILNAPYPRAYFRCTRKydqLCRATKQVQQVQENPRLYQTTYIGQHTCK 191 79***********************998778************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGSNHKRLIK ELVEGKKTAT ELQMLLQKPF GDHGSASAEE LVVKIMTSFT ESLFVLAAEK 60 KNPGDGHEDH QSGAFGEVYQ IKPEPSHSHC DDRSSGDSGE SRKGQGSKDR RGCYKRRKTS 120 QSWTTVSPAI EDGRAWRKYG QKEILNAPYP RAYFRCTRKY DQLCRATKQV QQVQENPRLY 180 QTTYIGQHTC KSVVLPQMII GSSDPWESQT VSSESGTPNK QNHDLLGSSA IPVVKQEEYK 240 EGTPTPSDLT DNLSSLETNN LWSDFKDDFP LCDPTAMCVS TKMASDNEDV VSNMYLDMDF 300 VVKSIDFDGD FNFDEVEFPK NSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	142	KRRKTSQSWTTVSPAIEDGRAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	6e-38	WRKY family protein