PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001539.1_g250.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 796aa MW: 87333.5 Da PI: 6.1089

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001539.1_g250.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	7e-16	499	537	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk Pav_sc0001539.1_g250.1.mk 499 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 537 689**********************************96 PP
2	TCR	50.5	4.1e-16	584	622	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN Pav_sc0001539.1_g250.1.mk 584 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 622 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV 60 SAHKESRFLR RHNTSDPSKP ESTLASGNKV SANEDAAQLY INSEELREDC VPGVSTGEDS 120 VEPSSEHSKF VIELPRNLKY DCGSPDCDPT RCGTEAHCEL EVADLSAPLV PYVQKTSEEG 180 SSNDEGHLQI ICQTVQRKEV TGCDWESLIS DAADLLIFDS PNGTEAFKGL MQNSLDPVTR 240 FCTSLAPQLT QNDVNDEQNV QVLDIVGSGG QLETEDPSSQ YGEASQLERT EQMEGHLNHC 300 MVSSQSEKED NKVETPMQFN CKPAVLNLQR GLRRRCLDFE MAGARRKSLD NVSNSSSNML 360 SQSDEKITTN DKQLVPMKPG GESSRCILPG IGLHLNALAK TSKDYKIIKC ESLAYDRQLS 420 LPNSTADIHS PTGGQGPGHE SFSSASSERD MDVAENGVQL AHDASQEPAF LANEEFNQNS 480 PKKKRHVLRR FEHAGETESC KRCNCKKSKC LKLYCECFAA GVYCIEPCSC QECFNKPIHE 540 DTVLATRKQI ESRNPLAFAP KVIRSSDSVP ELGEESSKTP ASARHKRGCN CKKSSCLKKY 600 CECYQGGVGC SISCRCEGCK NAFGRKDGSF IGTEAELDEE EAEACEKSVA EKHQQKIEIQ 660 KNEEQRPDSA LPTTPLRLSR QMVSLPFSSK NKPPRSSVFS IGGSSSGLYT SQKLGKPNIL 720 RPESKFERHS QTVPEDEMPE ILQGDGSPST GVKTASPNSK RVCPPNSDFG PSPGRRTGRK 780 LILQSIPSFP SLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MDTPERNQIG TPKAKFEDSP VFNYINSLSP IKPVKSVHIT QTFSSLSFAS LPSVFTSPHV  60
SAHKESRFLR RHNTSDPSKP ESTLASGNKV SANEDAAQLY INSEELREDC VPGVSTGEDS  120
VEPSSEHSKF VIELPRNLKY DCGSPDCDPT RCGTEAHCEL EVADLSAPLV PYVQKTSEEG  180
SSNDEGHLQI ICQTVQRKEV TGCDWESLIS DAADLLIFDS PNGTEAFKGL MQNSLDPVTR  240
FCTSLAPQLT QNDVNDEQNV QVLDIVGSGG QLETEDPSSQ YGEASQLERT EQMEGHLNHC  300
MVSSQSEKED NKVETPMQFN CKPAVLNLQR GLRRRCLDFE MAGARRKSLD NVSNSSSNML  360
SQSDEKITTN DKQLVPMKPG GESSRCILPG IGLHLNALAK TSKDYKIIKC ESLAYDRQLS  420
LPNSTADIHS PTGGQGPGHE SFSSASSERD MDVAENGVQL AHDASQEPAF LANEEFNQNS  480
PKKKRHVLRR FEHAGETESC KRCNCKKSKC LKLYCECFAA GVYCIEPCSC QECFNKPIHE  540
DTVLATRKQI ESRNPLAFAP KVIRSSDSVP ELGEESSKTP ASARHKRGCN CKKSSCLKKY  600
CECYQGGVGC SISCRCEGCK NAFGRKDGSF IGTEAELDEE EAEACEKSVA EKHQQKIEIQ  660
KNEEQRPDSA LPTTPLRLSR QMVSLPFSSK NKPPRSSVFS IGGSSSGLYT SQKLGKPNIL  720
RPESKFERHS QTVPEDEMPE ILQGDGSPST GVKTASPNSK RVCPPNSDFG PSPGRRTGRK  780
LILQSIPSFP SLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	482	509	KKKRHVLRRFEHAGETESCKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-137	CPP family protein