PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001518.1_g260.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 679aa MW: 74652.7 Da PI: 6.153

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001518.1_g260.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	2.9e-09	421	458	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + Pav_sc0001518.1_g260.1.mk 421 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 458 664459******************************88 PP
2	BELL	128.9	1.7e-41	283	354	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+++ag+g+akpYt++Al++iSrhFrcL+dai++qi Pav_sc0001518.1_g260.1.mk 283 EKQELQSKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTAVALQTISRHFRCLRDAITGQI 354 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MSAYYTGSNN QKDATPMLYL REPLPSSYPE APVLPGNMMM YMNSGSYSDA LAGSSQQQNN 60 CIDVVSSAGA SDNNSQQQDV LSHLGGSRVG EQGFSPWREG RNEMLVTHPM GGSAAILHGG 120 QNLQGQGLSL SLSTQIPSGM QMPSIPYRNP NMGFASFLSP NPSISSEGDC RNGSFRDEQP 180 RNVEYLQSGF PGGNPDSSKG DLSPYGMSSI ARAIPNNKYL KAAQQLLDEV VNVQKALKQH 240 DREKNQSTHE HRDDGSKNEL ESGVSSNPQD TASNSQCELS HAEKQELQSK LTKLLSMLDE 300 VDRRYKQYYH QMQIVVSSFD VIAGCGAAKP YTAVALQTIS RHFRCLRDAI TGQIRATRKS 360 LGEEGASGSI KGVGISRLRY VDQQLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL 420 FEHFLHPYPK DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE EAGDAEMDSN 480 SSSENAPQTK KSDMRTMEDG VEDMQPSASS TCTERCSTGQ FMDSKSDHFH DVEMAGSTGS 540 ASFQNGTRRE AEAQYGLVKL REGQRAGMDD CSLFSDPNVH SDRSSERYME AADAYHMPEL 600 GRFGSGSGVS LTLGLQHCDG GSLPISTGTH HSFVAMRGDD LYNPAASSVG SETADFECMD 660 SGNQQHRFGS SHLLRDFVV

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MSAYYTGSNN QKDATPMLYL REPLPSSYPE APVLPGNMMM YMNSGSYSDA LAGSSQQQNN  60
CIDVVSSAGA SDNNSQQQDV LSHLGGSRVG EQGFSPWREG RNEMLVTHPM GGSAAILHGG  120
QNLQGQGLSL SLSTQIPSGM QMPSIPYRNP NMGFASFLSP NPSISSEGDC RNGSFRDEQP  180
RNVEYLQSGF PGGNPDSSKG DLSPYGMSSI ARAIPNNKYL KAAQQLLDEV VNVQKALKQH  240
DREKNQSTHE HRDDGSKNEL ESGVSSNPQD TASNSQCELS HAEKQELQSK LTKLLSMLDE  300
VDRRYKQYYH QMQIVVSSFD VIAGCGAAKP YTAVALQTIS RHFRCLRDAI TGQIRATRKS  360
LGEEGASGSI KGVGISRLRY VDQQLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSILRAWL  420
FEHFLHPYPK DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE EAGDAEMDSN  480
SSSENAPQTK KSDMRTMEDG VEDMQPSASS TCTERCSTGQ FMDSKSDHFH DVEMAGSTGS  540
ASFQNGTRRE AEAQYGLVKL REGQRAGMDD CSLFSDPNVH SDRSSERYME AADAYHMPEL  600
GRFGSGSGVS LTLGLQHCDG GSLPISTGTH HSFVAMRGDD LYNPAASSVG SETADFECMD  660
SGNQQHRFGS SHLLRDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-122	TALE family protein