PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001461.1_g640.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Nin-like

Protein Properties

Length: 912aa MW: 101848 Da PI: 6.2604

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001461.1_g640.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92	4.5e-29	592	643	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek i+le+l+kyFs+++kdAA+++gvc T+LKriCRq+GIkRWP+Rkik++ Pav_sc0001461.1_g640.1.mk 592 AEKAITLEVLRKYFSGSLKDAANSIGVCSTTLKRICRQHGIKRWPSRKIKKV 643 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 912 aa Download sequence
MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SGAHLNPSVF 60 WHTLEANGNL TMNPSENSNQ EVIQTPFFKQ LHKGPVNPQF PSQNMIDVDG YSGHSADPTI 120 KSYELNRRWW IGPLENQGPA SSVMERLTRA LVCIRDVMRD KNVLVQVWVP VNKGGRNVLT 180 TNDDLFSLNS SCPRLSKYRD ISVNYQFSTG EDSTELVKGL PGRVFSGQVP EWTPDVRFFR 240 SDEYPRVDYA QRYDVRGTLA LPIFEQGSRT CLGVIEVVTT TQKTKYQLEL ESVCKALEDV 300 DLQSSRNWRT QNIKGCVKPY QAALPEIQEV LKSACETHKL PLAQTWVSCI QQGKDGCRHS 360 DDNYIHCVST LDHAFHVTDP YIEDFHEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV 420 KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDYVLEFFLP VECRDPEEQK KMLNSLSLII 480 QQICRSLRVV TDKELEEESD FPVSEMLVSS DPRPSGIASF TEVQLSGNDV SIFPMENPRE 540 VLGVKSSKLR QHQPESNLKG GVECGTECST LGEGSFSSVG VSKTREKRRT KAEKAITLEV 600 LRKYFSGSLK DAANSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA 660 SGAFQINSFY TNFPELTSPN LSGTSPFSTS KLSDQPKPTN LSPEGGVVSP QATASKSPSS 720 SCSQSSSSSQ CCSSRTQQHP PTCNVTGDDD PIVGDNSGDG VLKRVRSEAE LHAFGQDRTQ 780 LLPRSQSHKI LNELQKLQPI PPSLKNNGVA QEGEVQRVKV AYGDEKTRFR MRSDWRYEDL 840 VQEIAKRFSI EDMSIFDIKY LDDDSEWVLL TCDADLEECI DVCRSSQSHT IKLSLHLSRH 900 HLRRFIGING PS

Sequence ? help Back to Top

Protein Sequence Length: 912 aa Download sequence

MDDDVLSPAT MMGAQPDSAT DLDFMDELFL EGCWLETTDG PEFPNQSHAN SGAHLNPSVF  60
WHTLEANGNL TMNPSENSNQ EVIQTPFFKQ LHKGPVNPQF PSQNMIDVDG YSGHSADPTI  120
KSYELNRRWW IGPLENQGPA SSVMERLTRA LVCIRDVMRD KNVLVQVWVP VNKGGRNVLT  180
TNDDLFSLNS SCPRLSKYRD ISVNYQFSTG EDSTELVKGL PGRVFSGQVP EWTPDVRFFR  240
SDEYPRVDYA QRYDVRGTLA LPIFEQGSRT CLGVIEVVTT TQKTKYQLEL ESVCKALEDV  300
DLQSSRNWRT QNIKGCVKPY QAALPEIQEV LKSACETHKL PLAQTWVSCI QQGKDGCRHS  360
DDNYIHCVST LDHAFHVTDP YIEDFHEACS EHHLLKGQGI VGKAFMTNQP CFSDDITSCV  420
KTEYPLSHHA RMFGLHAAVA IRLRSMKTGS TDYVLEFFLP VECRDPEEQK KMLNSLSLII  480
QQICRSLRVV TDKELEEESD FPVSEMLVSS DPRPSGIASF TEVQLSGNDV SIFPMENPRE  540
VLGVKSSKLR QHQPESNLKG GVECGTECST LGEGSFSSVG VSKTREKRRT KAEKAITLEV  600
LRKYFSGSLK DAANSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVEGA  660
SGAFQINSFY TNFPELTSPN LSGTSPFSTS KLSDQPKPTN LSPEGGVVSP QATASKSPSS  720
SCSQSSSSSQ CCSSRTQQHP PTCNVTGDDD PIVGDNSGDG VLKRVRSEAE LHAFGQDRTQ  780
LLPRSQSHKI LNELQKLQPI PPSLKNNGVA QEGEVQRVKV AYGDEKTRFR MRSDWRYEDL  840
VQEIAKRFSI EDMSIFDIKY LDDDSEWVLL TCDADLEECI DVCRSSQSHT IKLSLHLSRH  900
HLRRFIGING PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein