PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001405.1_g520.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 232aa    MW: 24626.1 Da    PI: 4.5139
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001405.1_g520.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.4e-1667116155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+G+r  +++g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+ +l+g
  Pav_sc0001405.1_g520.1.mk  67 PVYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYAKPEMAAAAYDVAAIALKG 116
                                68****6..678*********843...5***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MADPYRNVPK SDQPTPTSNS SNPAFIQLPP PAPPDPTPPA AHDRDSSSSP RPGPSGASTS  60
SSPRGHPVYR GIRSRSGKWV SEIREPRKTT RIWLGTYAKP EMAAAAYDVA AIALKGPDTA  120
LNFPNSILTY PIPASSAASD IRAAAARAAQ SRPEMISAGE SGGRSEPGGV KNEEGRVGQE  180
EEEEEEFMDE EALLNMPNLL VDMAEGMLVS PPRISSEDSP GNSDGGENLW SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-34ERF family protein