PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001405.1_g1690.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 437aa MW: 47415 Da PI: 4.6889

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001405.1_g1690.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.6	4e-31	230	288	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+g+Hnh+ Pav_sc0001405.1_g1690.1.mk 230 ADLWAWRKYGQKPIKGSPHPRNYYRCSSSkGCSARKQVERSTADPNIFVVTYTGDHNHP 288 699**********************998**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MADDWDLYAV VRSCKSATHN TTTNTSAAGA PTNPITPPSA EEEDPFWDWL KSEEETDPLF 60 SFPNLLEPRA NAFQELQQFY EPLLPNPTTT NNPSTNNTFV PPIIPNSPII PDFGGSASSG 120 QHHLQQQQHH FLPTNTPTSP HFNPAISPPG FGGFHGQQQP LLLPKPETQI LPQQLPTQQG 180 FMRPQAMVPA LPPPLPRVPI TMPINSPRPR KRKCQQKRQV CQVSAENLSA DLWAWRKYGQ 240 KPIKGSPHPR NYYRCSSSKG CSARKQVERS TADPNIFVVT YTGDHNHPRP THRNSLAGST 300 RNKSSATAGQ NQPINNDPGS PPAQADQDAV ANNVNSDNSL DKENEELDEE EEERDENEIE 360 DEDVEEDDVL IPNTAMSDEI FLGLKQLGCT SSSGSGGSLA AGASGDTFSD QEPSSLGSSW 420 AAANRSSAAG ATVGGGC

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MADDWDLYAV VRSCKSATHN TTTNTSAAGA PTNPITPPSA EEEDPFWDWL KSEEETDPLF  60
SFPNLLEPRA NAFQELQQFY EPLLPNPTTT NNPSTNNTFV PPIIPNSPII PDFGGSASSG  120
QHHLQQQQHH FLPTNTPTSP HFNPAISPPG FGGFHGQQQP LLLPKPETQI LPQQLPTQQG  180
FMRPQAMVPA LPPPLPRVPI TMPINSPRPR KRKCQQKRQV CQVSAENLSA DLWAWRKYGQ  240
KPIKGSPHPR NYYRCSSSKG CSARKQVERS TADPNIFVVT YTGDHNHPRP THRNSLAGST  300
RNKSSATAGQ NQPINNDPGS PPAQADQDAV ANNVNSDNSL DKENEELDEE EEERDENEIE  360
DEDVEEDDVL IPNTAMSDEI FLGLKQLGCT SSSGSGGSLA AGASGDTFSD QEPSSLGSSW  420
AAANRSSAAG ATVGGGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52830.1	4e-46	WRKY family protein