PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001341.1_g310.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 519aa MW: 58552 Da PI: 4.3963

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001341.1_g310.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.8	6.4e-19	70	127	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ng...krkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p++ g k+ r +lg+f ta++Aa a+++a+++++g Pav_sc0001341.1_g310.1.mk 70 CVYRGVRQRT-WGKWVAEIREPNNsSGvskKNNRLWLGTFPTAYDAAFAYDEAARAMYG 127 68***999.******98878899566*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MTSEASDGDK KLRKRRNGCD SIEDTLAKWK NYNDRFDFAK DGVKKTRRAP SKGSKKGCMK 60 GKGGPENSDC VYRGVRQRTW GKWVAEIREP NNSSGVSKKN NRLWLGTFPT AYDAAFAYDE 120 AARAMYGGLA RLNFPQNTMK LKEYSNSVSS GTTKTTKTTS SSYESSTTYN NGDEAEGLDM 180 SSKCAMESSR FVVGESKERS DFFEDCVHKE PKQETDCSVG FATEDLEVLD ATLREAKDVK 240 CELETEYELA RNDAEETSVF QTGSYESFYH RPDYLHNELQ VVNLDSVPDG KPYNDWESLE 300 TLLRSSNDYL NNELVDAECN RRNDCNPSED VNVEKPVTSE AMEKEFPMIL ESGSHNGLDD 360 SCHYMHNEQI NVASNLVTAD FEPSNDVEIK GSMTDQELQG GLVETTNLNG HNGFIDGYAC 420 LDDIRPSNDI EMQENRLANL HNWSVEESYD IDAQNQQWGR LPNLPNQLQT QPQVNIPGNL 480 AHMEEASLGI DFDVDLFRQN YDSGVLEEQV FHGSWFPYS

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MTSEASDGDK KLRKRRNGCD SIEDTLAKWK NYNDRFDFAK DGVKKTRRAP SKGSKKGCMK  60
GKGGPENSDC VYRGVRQRTW GKWVAEIREP NNSSGVSKKN NRLWLGTFPT AYDAAFAYDE  120
AARAMYGGLA RLNFPQNTMK LKEYSNSVSS GTTKTTKTTS SSYESSTTYN NGDEAEGLDM  180
SSKCAMESSR FVVGESKERS DFFEDCVHKE PKQETDCSVG FATEDLEVLD ATLREAKDVK  240
CELETEYELA RNDAEETSVF QTGSYESFYH RPDYLHNELQ VVNLDSVPDG KPYNDWESLE  300
TLLRSSNDYL NNELVDAECN RRNDCNPSED VNVEKPVTSE AMEKEFPMIL ESGSHNGLDD  360
SCHYMHNEQI NVASNLVTAD FEPSNDVEIK GSMTDQELQG GLVETTNLNG HNGFIDGYAC  420
LDDIRPSNDI EMQENRLANL HNWSVEESYD IDAQNQQWGR LPNLPNQLQT QPQVNIPGNL  480
AHMEEASLGI DFDVDLFRQN YDSGVLEEQV FHGSWFPYS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	16	DKKLRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11020.1	5e-28	ERF family protein