PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001341.1_g070.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 339aa    MW: 38255.4 Da    PI: 7.7001
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001341.1_g070.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.81.2e-2867116251
                    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                prlrWtp+LH rF++ave+LGG+e+AtPk +l+lm++kgL+++hvkSHLQ
  Pav_sc0001341.1_g070.1.mk  67 PRLRWTPDLHLRFIHAVERLGGQERATPKLVLQLMNIKGLSIAHVKSHLQ 116
                                8************************************************* PP
2Myb_DNA-binding50.25.8e-1668118147
                                TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqky 47 
                                r+rWT+++++++++av++lGg    t+k++ + m+ kg++  ++ks++q  
  Pav_sc0001341.1_g070.1.mk  68 RLRWTPDLHLRFIHAVERLGGQeraTPKLVLQLMNiKGLSIAHVKSHLQVI 118
                                89**********************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEGDSDSSKT SPSGEQNEGG SESGENYDDI EESGKPKNNG GSSSNSTVEE SDQRKASVRP  60
YVRSKMPRLR WTPDLHLRFI HAVERLGGQE RATPKLVLQL MNIKGLSIAH VKSHLQVILS  120
TKPLNFLLIF LADHQGHLVE CGDKNIYNLS QLPMLQGYNR SHSTSFRYGD ANSWTAYENP  180
RYPRSTGFQG NWSSSSAYNY LTSCSFGEQS SWIARTLKQE CKLYNIRESL QAQHQHQARL  240
SQQLIDLNPT NTHVQVQPKP KELITSFNNN LELTSKKNED HQSKSLKRKA SSDCEDLDLD  300
LSLRLTSRNK NEDDIHEVDS SLSLSLYSPP SSKLSRLKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-50G2-like family protein