PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001309.1_g960.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 327aa MW: 36439.5 Da PI: 7.0367

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001309.1_g960.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.9	3e-40	52	112	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ Pav_sc0001309.1_g960.1.mk 52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 112 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGHNSLQVCM DSSDWLQGTM HEDSPMDSSS PLSGDMLTCS RPLIERRLRP QHDQALKCPR 60 CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK VASKKPNEPH 120 NPLMNQNAGS SSSSVSHNPT DLHLSFPDQM QFSHLNGLML GSNNNPSFMD SRYNGMLESN 180 NNNNPRPIDF MESKLEAIVG NARNYDFMGN GADLGMMGGL ANNMGGESSF HHGLCSPFGM 240 SSFDGQNGNF MDTCQRLMLP YDHQASHDQD HHQNGMDVKP NTKLLSLEWQ DQGCSDHGKE 300 SFGYLNGLGS WTNVMNNYGP STTNPLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	7e-54	Dof family protein