PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001309.1_g720.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 186aa MW: 20996.1 Da PI: 9.7495 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.1 | 4.1e-10 | 15 | 67 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-..STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskK..lsKaeiLekAveYIksLq 55 + +Er+RR +++ ++L +l+P+ skap+ K ls L +A YIk+L+ Pav_sc0001309.1_g720.1.mk 15 KTVERNRRIHMKGLCFKLASLIPPqHSKAPNSKdtLSQQNQLDLASSYIKQLR 67 679*********************888999999899***************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MKKCSGESSS KLDRKTVERN RRIHMKGLCF KLASLIPPQH SKAPNSKDTL SQQNQLDLAS 60 SYIKQLRERI ENLKERKEKA TRSQLGIDAN STIDADNAMM VRSRLPVIEL RDSGSIIEVM 120 LISGLNKNFM LYEVISVLEE EGAEVVSASF STVGDKVFHS LHAQVKFSRV GVETSTVWQR 180 LQDLIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 7e-33 | bHLH family protein |