PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001305.1_g900.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 377aa MW: 41136 Da PI: 8.0319

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001305.1_g900.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.6e-39	67	127	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ Pav_sc0001305.1_g900.1.mk 67 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 127 57899*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MLSNCDHEKM VLISSTTNEW PQMQQQQDNI QIDDHHQKGL NNNMPSSTSS PATRIMEKPG 60 QEQLQLQQQA LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGGC 120 RKNKRVKRPG SSSSSTMDGA SSSSSSVPSN TANNNNSNSN PPSQPSQIDQ INPLFYGLPS 180 NPFMDSPSSA SGFDLHQLNH HHAQLGLGFS SAGTFMSGDN YRNRFNPTSN SSLPSSNYSS 240 IFSTSASTTT TTPTMASVLA SKFLNGGSFK DIQARGPNHH QYFQSLLPFE DLHIAAGNTG 300 EAGGAAKDVK VEDQAGQNRL EWNNNSNNNN VNANMNCQNQ MTEQMGLSDP SLYWSSTTLG 360 ANWHDPSNLG SSVSSLI

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MLSNCDHEKM VLISSTTNEW PQMQQQQDNI QIDDHHQKGL NNNMPSSTSS PATRIMEKPG  60
QEQLQLQQQA LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA CKRYWTRGGT LRNVPVGGGC  120
RKNKRVKRPG SSSSSTMDGA SSSSSSVPSN TANNNNSNSN PPSQPSQIDQ INPLFYGLPS  180
NPFMDSPSSA SGFDLHQLNH HHAQLGLGFS SAGTFMSGDN YRNRFNPTSN SSLPSSNYSS  240
IFSTSASTTT TTPTMASVLA SKFLNGGSFK DIQARGPNHH QYFQSLLPFE DLHIAAGNTG  300
EAGGAAKDVK VEDQAGQNRL EWNNNSNNNN VNANMNCQNQ MTEQMGLSDP SLYWSSTTLG  360
ANWHDPSNLG SSVSSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	2e-34	Dof family protein