PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001242.1_g140.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 976aa MW: 107846 Da PI: 5.5614

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001242.1_g140.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.1	1.5e-31	244	299	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFve ++qLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Pav_sc0001242.1_g140.1.mk 244 KQRRCWSPELHRRFVESLQQLGGTQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 299 79****************************************************97 PP
2	Myb_DNA-binding	40.3	7.4e-13	246	297	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+ +qlGg t+k I + m+ g+t ++ks++qky+ Pav_sc0001242.1_g140.1.mk 246 RRCWSPELHRRFVESLQQLGGTqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 297 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 976 aa Download sequence
MELSLDTSLV FIPKTISDFL VQLSTMEDSS QRSSELDAYV KRLEDEMRKI EVFKRELPLC 60 MLLLKDAIER LKDKVMQCKK MEDRPVIEEF IPLKGNLEGK ENSDKKNWMS SAQLWSTSLN 120 VFEYSNHDSV SGLRLRNVED DRSVPENPIE PSNNRAVGRT FVPFKEQYES GFTGTCLKDD 180 KEVSQVPSLS LMTPLMSEAL DASTNTNIKS NNNCRGGSGS GLAGQLKLQN KPQQQSQQQQ 240 PFRKQRRCWS PELHRRFVES LQQLGGTQVA TPKQIRELMQ VDGLTNDEVK SHLQKYRLHV 300 RKLPTSSAAK GNGIWMPLDH SADHSKANNS QSGSPQGPLL PGEFAKGRST TGGESDNSRE 360 AEEDEKSDGQ SWKGPTKCLS FWQTAKTHRP TSQSSFVSHN PFGSKFIPSL RSLGSFAGSE 420 TMRELVTLQV GSFANFVGSH FWNFQDELNG LAEDPYADPV FKNQSLNMDV LYRSGETHQG 480 TLTYTPRLVS VDLQGSLGSM SSRGTLYDEG SSASSNILTW GGNFSTHAAE PHKKNLFLQS 540 LYGEEQENSL TFENGVTGGE NPRTEIHDRD KVESLENGVQ YWTDFSKVEY HPQSLYELSG 600 LWVDPQKFDN YGIGRESLSG GLQVEEISER LRFFVEECDH IQGFQFIVDD SGGFSPLAVD 660 VLESIADEYT NVPVLLYAVR GPGSSVDPRS QKQRVSRKLH DAVSFSRLSS LCKLIVPVGL 720 PSLSRTYAAT LHSLSLPFRM EPLGPTADSS YASGAVTVNE VVQILSGQAR QNMVAILDAA 780 MPAPSLTGNE VEQTLLRHLQ PLTPEIAKDI EDLQSVESIS VHGALGPGGQ RASVSEVKDM 840 VHAAYEHATT RPMFCHLSVV QCPLPIPLPF PSIFGNRVGQ HGELLSTPII DSPSRGSLDV 900 HSIPMAARLR SSSAVLPFLE NRLGSLRSFG IARGAPGAEL VRSWGFAKDE LEDMGEVLSK 960 MITTLDPRSQ MSSDSD

Sequence ? help Back to Top

Protein Sequence Length: 976 aa Download sequence

MELSLDTSLV FIPKTISDFL VQLSTMEDSS QRSSELDAYV KRLEDEMRKI EVFKRELPLC  60
MLLLKDAIER LKDKVMQCKK MEDRPVIEEF IPLKGNLEGK ENSDKKNWMS SAQLWSTSLN  120
VFEYSNHDSV SGLRLRNVED DRSVPENPIE PSNNRAVGRT FVPFKEQYES GFTGTCLKDD  180
KEVSQVPSLS LMTPLMSEAL DASTNTNIKS NNNCRGGSGS GLAGQLKLQN KPQQQSQQQQ  240
PFRKQRRCWS PELHRRFVES LQQLGGTQVA TPKQIRELMQ VDGLTNDEVK SHLQKYRLHV  300
RKLPTSSAAK GNGIWMPLDH SADHSKANNS QSGSPQGPLL PGEFAKGRST TGGESDNSRE  360
AEEDEKSDGQ SWKGPTKCLS FWQTAKTHRP TSQSSFVSHN PFGSKFIPSL RSLGSFAGSE  420
TMRELVTLQV GSFANFVGSH FWNFQDELNG LAEDPYADPV FKNQSLNMDV LYRSGETHQG  480
TLTYTPRLVS VDLQGSLGSM SSRGTLYDEG SSASSNILTW GGNFSTHAAE PHKKNLFLQS  540
LYGEEQENSL TFENGVTGGE NPRTEIHDRD KVESLENGVQ YWTDFSKVEY HPQSLYELSG  600
LWVDPQKFDN YGIGRESLSG GLQVEEISER LRFFVEECDH IQGFQFIVDD SGGFSPLAVD  660
VLESIADEYT NVPVLLYAVR GPGSSVDPRS QKQRVSRKLH DAVSFSRLSS LCKLIVPVGL  720
PSLSRTYAAT LHSLSLPFRM EPLGPTADSS YASGAVTVNE VVQILSGQAR QNMVAILDAA  780
MPAPSLTGNE VEQTLLRHLQ PLTPEIAKDI EDLQSVESIS VHGALGPGGQ RASVSEVKDM  840
VHAAYEHATT RPMFCHLSVV QCPLPIPLPF PSIFGNRVGQ HGELLSTPII DSPSRGSLDV  900
HSIPMAARLR SSSAVLPFLE NRLGSLRSFG IARGAPGAEL VRSWGFAKDE LEDMGEVLSK  960
MITTLDPRSQ MSSDSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	6e-53	G2-like family protein