PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001196.1_g990.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 306aa MW: 35130.6 Da PI: 5.6373 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.5 | 6.5e-15 | 10 | 100 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 k+ +++ + + +rl++pk+f+++hg+ s ++ l+ + g + e+kl rk+ g++ ++kGW eF k L+ g +vF+++ Pav_sc0001196.1_g990.1.mk 10 MKT-ITNTNARDKRLRVPKTFMDKHGEH--LSDQIHLKLPGGLESEIKL--RKCAGEFSFEKGWPEFSKFCSLDFGSCLVFRYE 88 444.4778888899***********955..8889***************..********************************* PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 g+s+f +v +f++ Pav_sc0001196.1_g990.1.mk 89 GKSKF--HVLIFDE 100 99999..***9986 PP | |||||||
2 | B3 | 43.4 | 5.9e-14 | 229 | 305 | 17 | 98 |
E--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p +f +h +++t +l rsW v+l +++ y++++GW F kan LkegD+++F+l++r++ l v +fr Pav_sc0001196.1_g990.1.mk 229 HVPASFR-KHftP---GKNQTARLLV-GHRSWPVTL--IFHPRNYLFSAGWGAFEKANWLKEGDTCIFELMDRKNLALEVNIFR 305 4566665.44231...3445677666.569******..667777***************************99***9***9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MAAKKIPHFM KTITNTNARD KRLRVPKTFM DKHGEHLSDQ IHLKLPGGLE SEIKLRKCAG 60 EFSFEKGWPE FSKFCSLDFG SCLVFRYEGK SKFHVLIFDE SGTEIEYPTM PHIEETDEEE 120 DDDMSIKEIL EIEDDEEDND KSVESLEIET DESLEILLID EDDDDDVKSV ESFEFFPPPQ 180 EKNRRKPRSS SKASSSSSSS LRATVKAANK FVSSHPFFKI TLGPSRKAHV PASFRKHFTP 240 GKNQTARLLV GHRSWPVTLI FHPRNYLFSA GWGAFEKANW LKEGDTCIFE LMDRKNLALE 300 VNIFRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49475.1 | 3e-19 | B3 family protein |