PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001110.1_g350.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 523aa MW: 56802.5 Da PI: 6.5062

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001110.1_g350.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	9e-31	287	345	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Pav_sc0001110.1_g350.1.mk 287 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 345 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MCSLFMPITR MENYQGDLTD ILRAGSAATS TAGAYRSDHL LHHHHQEPQA AADSWHFPSD 60 HPPPMKFSSA SSAMEEEEEE DAKDNFGDPF SSYMRDPLLH ELDISSSSSF FSSPNSSSDM 120 NINISSVDEA VGPSSTFGGA HIVLAPPPPP PHHHHLHHHQ QGGVVDGDPI KRPCNIFSRM 180 LQISPSAKVP VTACDSPLLG AATAVSSPRG INKAVSGSIS GAMVGSDMII NGNSSSGKGC 240 LLENTGVQIS SPRNPGIKRR KSQAKKVVCI PAPAAANSRP TGEVVPSDLW AWRKYGQKPI 300 KGSPYPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ 360 PSKNGAASKT SPNSSHQPHQ KPASPTKEEQ NETMNDDNHV SPVITAGSAS TVKEEFEDIE 420 KQLELDHHQF NGDHQAGFPY RPSMPDDQSN QSHHNEDFFA DLGEIEADPL NLLFSQCFTA 480 DEQQKGSKAA ALDPFNLFDW SGDQNTNNNN NNTSFGEAAK RRL

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MCSLFMPITR MENYQGDLTD ILRAGSAATS TAGAYRSDHL LHHHHQEPQA AADSWHFPSD  60
HPPPMKFSSA SSAMEEEEEE DAKDNFGDPF SSYMRDPLLH ELDISSSSSF FSSPNSSSDM  120
NINISSVDEA VGPSSTFGGA HIVLAPPPPP PHHHHLHHHQ QGGVVDGDPI KRPCNIFSRM  180
LQISPSAKVP VTACDSPLLG AATAVSSPRG INKAVSGSIS GAMVGSDMII NGNSSSGKGC  240
LLENTGVQIS SPRNPGIKRR KSQAKKVVCI PAPAAANSRP TGEVVPSDLW AWRKYGQKPI  300
KGSPYPRGYY RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSTRSQ  360
PSKNGAASKT SPNSSHQPHQ KPASPTKEEQ NETMNDDNHV SPVITAGSAS TVKEEFEDIE  420
KQLELDHHQF NGDHQAGFPY RPSMPDDQSN QSHHNEDFFA DLGEIEADPL NLLFSQCFTA  480
DEQQKGSKAA ALDPFNLFDW SGDQNTNNNN NNTSFGEAAK RRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30650.1	9e-89	WRKY family protein