PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001109.1_g160.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 61aa    MW: 7076.02 Da    PI: 9.3004
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001109.1_g160.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000484561319
                               ETTTTEEESSHHHHHHH CS
                    zf-C2H2  3 CpdCgksFsrksnLkrH 19
                               C+ C+k F++  +L +H
  Pav_sc0001109.1_g160.1.mk 45 CNLCTKKFTDVTDLFNH 61
                               ***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MVAEGSITFR NVTQKQEHYM QFHPEIQTSS KNEKGKKKAD KDKACNLCTK KFTDVTDLFN  60
H