PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001106.1_g320.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 558aa MW: 61645.6 Da PI: 5.0201

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001106.1_g320.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.3e-30	269	328	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Pav_sc0001106.1_g320.1.mk 269 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 328 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MGREKEMGLD IDLSLKIDSK QEKQGEAGDQ GEGEEEEEEE DHNDDNDIEQ GAQQEKEDEQ 60 EPRAQNNNQK AAEAAAGEVE DDASVVETSL EENNMKTDQE LCVLQMEMSR MKEENKVLRK 120 VVDQTMKDYY DLQMKFTALH QRNQNKDPQT FLSLDGNDPD AVQGPKTIPK RSPLSPTRED 180 MMKESQLGLS LRLQTSPSTN IQLHGREEED DDKEETNKKE ELTSSSLASS LLQNKLQRTE 240 LAGISSHVAS QPNRKARVSV RARCESATMN DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG 300 CPVRKQVQRC LEDMSILITT YEGTHNHPLP VGATAMASTA SAAASFMLLD SSNHHLLDGT 360 ASNYTQASLP NYYNGFDHRM NPSSHSSFRT INPHDPSKGI VLDLTNNFYD HNNTPQNIPM 420 GSSSSHSSAP PGFSNWMMST SRSASSYQNP NSITSHLLAN STISRSSGVG VEDQRSWRGE 480 ENNMSLAENV TAIASDPKFR VAVAAAITSL INKENHTANH LFGPRDGGEN GSSASNNWAL 540 DHQSLSANGK PIRKNSLE

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MGREKEMGLD IDLSLKIDSK QEKQGEAGDQ GEGEEEEEEE DHNDDNDIEQ GAQQEKEDEQ  60
EPRAQNNNQK AAEAAAGEVE DDASVVETSL EENNMKTDQE LCVLQMEMSR MKEENKVLRK  120
VVDQTMKDYY DLQMKFTALH QRNQNKDPQT FLSLDGNDPD AVQGPKTIPK RSPLSPTRED  180
MMKESQLGLS LRLQTSPSTN IQLHGREEED DDKEETNKKE ELTSSSLASS LLQNKLQRTE  240
LAGISSHVAS QPNRKARVSV RARCESATMN DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG  300
CPVRKQVQRC LEDMSILITT YEGTHNHPLP VGATAMASTA SAAASFMLLD SSNHHLLDGT  360
ASNYTQASLP NYYNGFDHRM NPSSHSSFRT INPHDPSKGI VLDLTNNFYD HNNTPQNIPM  420
GSSSSHSSAP PGFSNWMMST SRSASSYQNP NSITSHLLAN STISRSSGVG VEDQRSWRGE  480
ENNMSLAENV TAIASDPKFR VAVAAAITSL INKENHTANH LFGPRDGGEN GSSASNNWAL  540
DHQSLSANGK PIRKNSLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	1e-66	WRKY family protein