PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001103.1_g040.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 560aa MW: 60761.4 Da PI: 4.8271 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.1 | 1.7e-17 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++vk++G g+W+++ ++ g+ R++k+c++rw ++l Pav_sc0001103.1_g040.1.mk 39 KGPWTSAEDAILVEYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHL 86 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 53.7 | 4.8e-17 | 92 | 135 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l+v++++++G++ W++ a++++ gRt++++k++w++ Pav_sc0001103.1_g040.1.mk 92 KGAFTPEEEHLIVELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 135 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 560 aa Download sequence |
MSRTTNESED GVLSKDQIES PLMDESNGGT GNGGIVLKKG PWTSAEDAIL VEYVKKHGEG 60 NWNAVQKHSG LFRCGKSCRL RWANHLRPNL KKGAFTPEEE HLIVELHAKM GNKWARMAAH 120 LPGRTDNEIK NYWNTRIKRR QRAGLPLYPP ELCLQALQES QQGQSCGGIN GADRAHHDSL 180 QTNSYEIPDV VFESLKGNNC VLPYVPEIPD LSASGVLMKG LSSSPYCGFM PPTMHRQKRL 240 RESTSLFSTS DGSFKNGFPQ FDHFQDDTCD EVGQSFGLSF PHDPDPTTKS PLSFGVIQGS 300 HSLSNGNSSA SKPTSGAVKL ELPSLQYPET DLGSWSTSPP PPLLESIDAF IQSPPPVGAF 360 ESDCASPRNS GLLDALLHEA KTLSSAKNLS SDKSSNSSSV TPGDIADSST LNICETEWED 420 YRDPISPLGH SATSLFSECT PISASGSSLD EPPPAETFTG CNVKPEPVDQ AWTPDKEKET 480 TPQLDYTRPD ALLASDWLEH STGFKDQGMT DSIASILGDD LATDYRHMAS GTSISNQVWG 540 LGSCLWNNMP AVCQMSSDLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.3 | 1e-138 | MYB family protein |