PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001020.1_g020.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 314aa MW: 34028.5 Da PI: 6.6002

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001020.1_g020.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.8	1.6e-35	17	72	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC +ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ Pav_sc0001020.1_g020.1.mk 17 PNCPRCGCSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 72 58***************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MERAGWKPND DHHQITPNCP RCGCSNTKFC YYNNYSLTQP RYFCKGCRRY WTKGGSLRNV 60 PVGGGCRKNR RGSKSLRLST TATAPEGHVH QSSKSATNLG SYGSAVHNSY GTNVIMNNSL 120 GDSTSSSVSQ DGSSIDLALV YANFLNQKPD DSNSTGSDHQ LPELPSEFDP AALDFSSMAL 180 NMNNASSGGN TISSIQLMED HQNGLVGSLG CHTENCSTND LMYFGGLDPL IHHHEKHHHQ 240 IQDASDFGLP PILPVGQEEA LWSTSQIMAH TSRPMQAAAT PLLGGGPEAH DPNLLIGSCW 300 SPFDLPCNEN FSRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	1e-45	Dof family protein