PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000998.1_g640.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 27541.7 Da PI: 9.2361 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.4 | 4.6e-07 | 83 | 128 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h +Er RR++ ++++ L ++lP+ a K +K i++++ I++Lq Pav_sc0000998.1_g640.1.mk 83 HMLNERMRREKQKQSYMALHSMLPNgA------KSDKNWIVQMTAMNIQQLQ 128 6789*********************66......899999*****99999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MNMDQYILEA LEGEFLLYES LPVLNQRAFV PYASRPITEE GLDKPPNYMN MNKRMVQFLR 60 KSWAPATARI ETGEDVRERG FRHMLNERMR REKQKQSYMA LHSMLPNGAK SDKNWIVQMT 120 AMNIQQLQRY KEELRKRNME FEAILAANEK ERVNWSKIRL RVANPTSGVD SMLEVLRCLQ 180 YLGLKARNVQ SNFSAQEFSA ELEIETKIGA AEIEEALQET LYEAERKLRF SLPGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 4e-45 | bHLH family protein |