PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000983.1_g140.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 181aa    MW: 19868.9 Da    PI: 10.6216
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000983.1_g140.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-204695255
                        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g
  Pav_sc0000983.1_g140.1.mk 46 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAARSLRG 95
                               69*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MAVDALHLRK TSLSLAVEPP SPPPRQPPAQ PKHSAHVKGG GAKEAHFRGV RKRPWGRFAA  60
EIRDPWKKTR KWLGTFDTAE EAALAYDEAA RSLRGPKAKT NFGAPAPALP HTLAIGGGSE  120
IFWTPPPVYF IGGAPSGAPV RSEYKGYKLE NVDLVVSEQE KKMRKEKKPF LFDLNLPAPL  180
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-24ERF family protein