PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000981.1_g210.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 320aa    MW: 35314.4 Da    PI: 8.8639
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000981.1_g210.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.51.5e-29167226159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  Pav_sc0000981.1_g210.1.mk 167 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHS 226
                                58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDYSSAAYDD TSLDLNTKPL RLFDDTPIKK DVHSKILIDF GRQLSANEES GALLEELQRV  60
SAENKKLTEM LTVMGESYNS LRSQLLDYMS KNPEKELSPI SKKRKSESSN NNNTNSNNII  120
NGAVNGNSES SSSDGESCKK PREETIKAKI SRAYVRTEAS DTTSLVVKDG YQWRKYGQKV  180
TRDNPCPRAY FKCSFAPSCP VKKKVQRSVE DQSILVATYE GEHNHSHPSQ IEATSGSNRS  240
MTLGSVPCST SLASSGPTIT LDLTKSKSSA DTKSIKTRTE TPEVRKFLVE QMASSLTKDP  300
DFTKALAAAI SGRILQHNSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.13e-94WRKY family protein