PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000909.1_g100.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 391aa    MW: 42607.4 Da    PI: 10.1159
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000909.1_g100.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.51.2e-05282304123
                                EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                y+C  CgksF + s L  H+++H
  Pav_sc0000909.1_g100.1.mk 282 YTCFECGKSFASGSALGGHMSSH 304
                                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MAFPSDIHNQ IGSINNTNGL IHTQMVYRSN YSTTIITTTY GLNGLPAVRS GFQNMHLLHS  60
PSSSSSSPAY WGGVVFPDRP VIPMIRSYQP RPPGLILSNP HMMIRETHVP VQPTQTGPTF  120
PEHTLNLNFM RFQPPRVALA PHFPLNNISS TSTLSGFHGR TGVMRNQQSS SQTYHYGDIS  180
PNPIMYTATR FRPPPSASII SDNQISLPTL VRATRFPTSS QSQFVPNHEP STSSSIIKEE  240
PRDDHQQTHV ARESTATTVA AASIAIATTS SRPRRPKPMG EYTCFECGKS FASGSALGGH  300
MSSHAKKRNL EAATSGKRFK PGDSFFDYVH HSSGFENGSS SRTATNPPTM SINGPSGPST  360
NEGTKGIEEP SGKREEKRSK NGDEEGPTSR Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1373380KREEKRSK