PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000908.1_g100.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 394aa MW: 44122.4 Da PI: 7.4705

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000908.1_g100.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.6	5.9e-33	258	313	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Pav_sc0000908.1_g100.1.mk 258 KQRRCWSPELHRRFVNALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 313 79****************************************************97 PP
2	Myb_DNA-binding	45.7	1.5e-14	260	311	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ Pav_sc0000908.1_g100.1.mk 260 RRCWSPELHRRFVNALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 311 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MGSVPPELSL DFRPTFVPKT ISDFLREVSM IGNVSERLSK LDDFVKRLEE EMRKIDAFKR 60 ELPLCMFLLN DAILALKEDA MQCAAPNVQP VLEEFIPLKK DCEKNNGGTN NNKKEKDCRD 120 KKNWMSSVQL WNTDNYQHPS SDFPYDRKQV SEIDSKRNEA ENGLANEDPF QTCRNRTGGR 180 AFMPFKTYPA FSVTAARKED KEELPIHGLS LLTPGIKNPK EESASSGSRS TCGRAVSFST 240 ANAQSNMRTP PQQPTSRKQR RCWSPELHRR FVNALQQLGG SQVATPKQIR ELMQVDGLTN 300 DEVKSHLQKY RLHTRRVPAA TAAPDNQSVV VLGGLWMSQD QYADSSKASS SQSGSPQGPL 360 HLTGTGGDDE DDEDAKSESY SWKGHIQKPG KDDV

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MGSVPPELSL DFRPTFVPKT ISDFLREVSM IGNVSERLSK LDDFVKRLEE EMRKIDAFKR  60
ELPLCMFLLN DAILALKEDA MQCAAPNVQP VLEEFIPLKK DCEKNNGGTN NNKKEKDCRD  120
KKNWMSSVQL WNTDNYQHPS SDFPYDRKQV SEIDSKRNEA ENGLANEDPF QTCRNRTGGR  180
AFMPFKTYPA FSVTAARKED KEELPIHGLS LLTPGIKNPK EESASSGSRS TCGRAVSFST  240
ANAQSNMRTP PQQPTSRKQR RCWSPELHRR FVNALQQLGG SQVATPKQIR ELMQVDGLTN  300
DEVKSHLQKY RLHTRRVPAA TAAPDNQSVV VLGGLWMSQD QYADSSKASS SQSGSPQGPL  360
HLTGTGGDDE DDEDAKSESY SWKGHIQKPG KDDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	2e-57	G2-like family protein