PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000893.1_g920.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 278aa MW: 30595.1 Da PI: 10.2745 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 340.7 | 3.7e-104 | 1 | 278 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaern 71 mddd+ + rn+gyyep+ +k +lglqlmss+aerd+k r+ + + ++++a+++rd ++ +rd+++++ Pav_sc0000893.1_g920.1.mk 1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSSMAERDTKAfvpgRDPAV-MVSSNGAFHPRDcvvsdapvpLNY-MRDSWVNQ-- 78 9***9999*******99..*******************9999999998.99**********999999999999.99999999.. PP GAGA_bind 72 kalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqr 155 ++k+l++++++ + + vl++t+ ++slq l+++ e + iee + +ke +kkr Pav_sc0000893.1_g920.1.mk 79 ------RDKFLNMMPANPN--------YAVLPETSGAHSLQI-----LQPPDSSRDE----RVARIEE-PVANKEGGPSKKRGG 138 ......789*****96654........899********9999.....4444444222....2344444.333344455555666 PP GAGA_bind 156 akkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCttti 239 + pk++k kk++k +k++++ +s+ +r+k kks+d+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++ Pav_sc0000893.1_g920.1.mk 139 GGAPKTPKVKKPRK----PKDNNN-PSV-PRVKPAKKSLDVVINGINMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTNV 216 67777777777776....222334.443.689**************************************************** PP GAGA_bind 240 SvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 S+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np+DL+ hWA+HGtnkfvtir Pav_sc0000893.1_g920.1.mk 217 SMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRGHWARHGTNKFVTIR 278 *************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MDDDALNMRN WGYYEPSFKG HLGLQLMSSM AERDTKAFVP GRDPAVMVSS NGAFHPRDCV 60 VSDAPVPLNY MRDSWVNQRD KFLNMMPANP NYAVLPETSG AHSLQILQPP DSSRDERVAR 120 IEEPVANKEG GPSKKRGGGG APKTPKVKKP RKPKDNNNPS VPRVKPAKKS LDVVINGINM 180 DISGIPIPVC SCTGAPQQCY RWGCGGWQSA CCTTNVSMYP LPMSTKRRGA RIAGRKMSQG 240 AFKKVLEKLA AEGYNFANPI DLRGHWARHG TNKFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 1e-110 | BBR-BPC family protein |