PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000890.1_g1060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 285aa    MW: 31541.9 Da    PI: 6.9291
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000890.1_g1060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.35.4e-11141164225
                     G2-like   2 prlrWtpeLHerFveaveqLGGse 25 
                                 pr+rWt++LH++Fv+av+ LGG+e
  Pav_sc0000890.1_g1060.1.mk 141 PRMRWTTTLHAHFVHAVQLLGGHE 164
                                 9*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MYLMNPIMRT SASPLPDLSL QISPPLAVDN QYHQADIGLS RKALYSTDRS STTDSGSSGS  60
DLSQENGFYH LERSNGYNLS SADEPKLSLG FEMKDHMSLP PVQLPRNFSN HHFHHHPQIY  120
GREFKRSART VGNVKRSIRA PRMRWTTTLH AHFVHAVQLL GGHESHEGQT DMGLNQKPGM  180
INGGLSGDKA NRGSWPSSSE TNGSCNLSPG NALTYSHSPQ SNGTKVEEEE SGRHVCDDGI  240
DMKERRTTLD CSSLSASDMY LNLEFTLGRP TAEWTVLNSL NLQMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.14e-24G2-like family protein