PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000877.1_g870.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 466aa MW: 50747.3 Da PI: 5.1657

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000877.1_g870.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.4e-40	125	185	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s Pav_sc0000877.1_g870.1.mk 125 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 185 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MLETKDPAIK LFGKKIPLPA DIEDLGFTQP EEKEVDVESE EEDEEDEEEE EAETEQDPPS 60 RKSPESMDQD DGPPNTEDPT NVGVLPDSDV NPMPPSMDEE SAKSNTAKTE NTEATNSQEK 120 TLKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK 180 NKNSASHYRH ITISEALQAA QIDAPNGAHH PALKSNGRVL SFGVDAPICD SMASVLNLAD 240 KKVSNGTQNG FHKSEERVIT TPCKGRENGD DGSRASSATV SKPQLQNVNG FSSQIPCLPG 300 VPWPYPWNSA VPPPAFCPPG FPLSFCPAPY WNCGVPGTWN VPWFGPQPAS PNQKSPSSGS 360 NSPRLGKHSR DGDILKPESL EKEEPSKQKS GRVLVPKTLR IDDPSEAAKS SIWATLGIKN 420 DSISGGGLFK AFQSKSDQKK NVSETSPALR ANPAALSRSL NFQESS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MLETKDPAIK LFGKKIPLPA DIEDLGFTQP EEKEVDVESE EEDEEDEEEE EAETEQDPPS  60
RKSPESMDQD DGPPNTEDPT NVGVLPDSDV NPMPPSMDEE SAKSNTAKTE NTEATNSQEK  120
TLKKPDKILP CPRCNSMDTK FCYYNNYNVN QPRHFCKACQ RYWTAGGTMR NVPVGAGRRK  180
NKNSASHYRH ITISEALQAA QIDAPNGAHH PALKSNGRVL SFGVDAPICD SMASVLNLAD  240
KKVSNGTQNG FHKSEERVIT TPCKGRENGD DGSRASSATV SKPQLQNVNG FSSQIPCLPG  300
VPWPYPWNSA VPPPAFCPPG FPLSFCPAPY WNCGVPGTWN VPWFGPQPAS PNQKSPSSGS  360
NSPRLGKHSR DGDILKPESL EKEEPSKQKS GRVLVPKTLR IDDPSEAAKS SIWATLGIKN  420
DSISGGGLFK AFQSKSDQKK NVSETSPALR ANPAALSRSL NFQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-113	Dof family protein