PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000877.1_g140.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19320.7 Da PI: 4.3509 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.7 | 5.8e-05 | 123 | 153 | 19 | 54 |
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +f Lr ++P+ +++Ka+ L Av YI++L Pav_sc0000877.1_g140.1.br 123 RFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 153 677899999995.....49***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MHGFQTLVCI PTPTGVLEIG SSDSIRENWS LVQQAKSLFG SDFICSVADL ETRSPIDFIN 60 RNFSFADIGI IAGIEEEEDD KKEVALDLTM MKRKGGNPGT GLYPDPNSNP KPDYSDFDSG 120 PQRFYALRAV VPNVSRMDKA SLLSDAVSYI NELKTKMDEL EGIGFDREEG KQRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 8e-23 | bHLH family protein |