PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000864.1_g020.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 188aa    MW: 21110.3 Da    PI: 8.0443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000864.1_g020.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-105494954
                               HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                r RR+ri ++f  L++l+P       +K++ +++Le+A++Y+k L
  Pav_sc0000864.1_g020.1.mk 54 ARERRHRISDRFKILQSLVPGG-----TKMDTVSMLEEAIHYVKFL 94
                               699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MDYFSATNNS SSDGSNSNSS SGTKHNGTGE KIKGGVKSKS KGVRLSTDPQ SVAARERRHR  60
ISDRFKILQS LVPGGTKMDT VSMLEEAIHY VKFLKAQIWL HQSMINFVDD DDRLHHDRSS  120
SSSSSSMFQY QLPADHHLHH PTGSHDFYSQ NNFVQPPSPA MNIPLPDPNY FQGQEAMPNI  180
EAYMKYYS