PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000852.1_g700.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 388aa MW: 43456.7 Da PI: 7.6448

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000852.1_g700.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.6	1.3e-35	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+y++++d+++++++sw e+ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Pav_sc0000852.1_g700.1.mk 25 FLTKTYQLVDDPATDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEF 99 9***************************************************************99.........*** PP XXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkkse 103 Fkkg+k+ll++i+r+k++ Pav_sc0000852.1_g700.1.mk 100 FKKGEKHLLCEIHRRKTA 117 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MALMIDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGEDDAT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPH 120 QVGFSHHHHH HHNPHSPLGI NGHHHPSFFP FPSRGSISPS DSDEPPNWCD SDSPPLPSPT 180 GGINNHNNNN NNFMNINNAS VTGLAEDNER LRRSNSVLMS ELAHMRKLYN DIIYFVQNHV 240 KPVAPSNSYP SSLLLCNPPP NSMAPAATAT KPSNFNQLLG YYPAPPTNAK QTPHMSTTTH 300 HHVMNSSSPS NTTSKSSSVT ILEDQQQPSS NGCKNTKLFG VPLLHSKKRL HPEEYGSNHG 360 TSMMEASKAR LILEKDDLGL HLMPPSAC

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MALMIDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPATDH IVSWGEDDAT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTAQPH  120
QVGFSHHHHH HHNPHSPLGI NGHHHPSFFP FPSRGSISPS DSDEPPNWCD SDSPPLPSPT  180
GGINNHNNNN NNFMNINNAS VTGLAEDNER LRRSNSVLMS ELAHMRKLYN DIIYFVQNHV  240
KPVAPSNSYP SSLLLCNPPP NSMAPAATAT KPSNFNQLLG YYPAPPTNAK QTPHMSTTTH  300
HHVMNSSSPS NTTSKSSSVT ILEDQQQPSS NGCKNTKLFG VPLLHSKKRL HPEEYGSNHG  360
TSMMEASKAR LILEKDDLGL HLMPPSAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-108	HSF family protein