PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000848.1_g620.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 1074aa MW: 119592 Da PI: 9.1741

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000848.1_g620.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19	2.4e-06	131	187	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +eL++ g+t +qV+ +F +R + +k Pav_sc0000848.1_g620.1.mk 131 KRPRDLLNPKAIKYMQSVFSIKDAISKKESRELSALFGVTGTQVRDFFNSQRSRVRK 187 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1074 aa Download sequence
SARATWTCFG FYSPTLVLHW SSFSFWKSKP NPNFISKPQN TWFRIPYVLH LALGIGAWRL 60 AMEDLSEMEI GSSVESFQKF LDSQRQLFHS QIDQLQKVVV TQCNLTGVNP LSQEMAAGAL 120 SVKIDGPFAG KRPRDLLNPK AIKYMQSVFS IKDAISKKES RELSALFGVT GTQVRDFFNS 180 QRSRVRKLVQ LSREKATRSS EHKELQDGVS TSSDPLTPID PVPLNSVGPS SVEDAPSCST 240 QDDALSGLDD LDKHFVDNIF NLMRKEETFS GQVKLMEWIL QIQNSSVLCW FLNTGGVMIL 300 ATWLSQAAIE EQTSVLLVIL KVLCHLPLHK ALPVHMSAIL QSVNRLRFYR TAGGLLLQKP 360 LWCFVTSIYL PLSLSNSSLV LISVWLNLSD VSNRARVLLS RWSKLLARIQ NMKKPNGMKT 420 SSDSQHDIDE VMGDESWKSN IDIPEDIFAT PFENAENSRR SEASEPLKLL TASSDESNKK 480 QILGVSSSQF RARRKVQLVE QPGQKSAGRS VQVTRATPVS KGRPMSADDI QKAKMRAQFM 540 QSKYGKSGSS NENKELKTEG GNKLSTSQAS ILPVVPKVPV RPNIEEPKKP VTLLLKERET 600 PNRLETSLAP KLRMDLKESI LEKCQRIQVP WNTPPEIKLD PEWRVGGGEN GKEIEVQRNR 660 NHREKETVYQ RVQEIPSNPK EPWDIEMDYD DSLTPEIPIE QPPDADGTET QASLSREVNN 720 AQAWVASSQG VNSAASLAPA LSQMNGASAA AEPDLELLAV LLKNPELVFA LTSGQAANLS 780 SEDTVKLLDM IKSGGAGNLN GLGRKMEERV EVSLPSPTPS SNPGTSGWRA DAGRNAFPQQ 840 MATTTNSLVS SAVHMIPSQR LSTSQAAVPS YSPDYFPPSM QTPAASEMAL TMKNTHLNNL 900 SNSYNVAERQ PNSFPQPLVS TPARQQRQPQ PLQQPRFSEP RLLTHMYPSK PQMGKPGPPP 960 SPSDSWRARQ DVPSNYHYLE NQNQYNASYG GPLQQPQLLP SPSWEGNEHV GGNQDFESWS 1020 PDNSPTRNPG YMYGREPRMN PARDYMPDRS RQMNPSGYRG QNRLGNRWPD RGRH

Sequence ? help Back to Top

Protein Sequence Length: 1074 aa Download sequence

SARATWTCFG FYSPTLVLHW SSFSFWKSKP NPNFISKPQN TWFRIPYVLH LALGIGAWRL  60
AMEDLSEMEI GSSVESFQKF LDSQRQLFHS QIDQLQKVVV TQCNLTGVNP LSQEMAAGAL  120
SVKIDGPFAG KRPRDLLNPK AIKYMQSVFS IKDAISKKES RELSALFGVT GTQVRDFFNS  180
QRSRVRKLVQ LSREKATRSS EHKELQDGVS TSSDPLTPID PVPLNSVGPS SVEDAPSCST  240
QDDALSGLDD LDKHFVDNIF NLMRKEETFS GQVKLMEWIL QIQNSSVLCW FLNTGGVMIL  300
ATWLSQAAIE EQTSVLLVIL KVLCHLPLHK ALPVHMSAIL QSVNRLRFYR TAGGLLLQKP  360
LWCFVTSIYL PLSLSNSSLV LISVWLNLSD VSNRARVLLS RWSKLLARIQ NMKKPNGMKT  420
SSDSQHDIDE VMGDESWKSN IDIPEDIFAT PFENAENSRR SEASEPLKLL TASSDESNKK  480
QILGVSSSQF RARRKVQLVE QPGQKSAGRS VQVTRATPVS KGRPMSADDI QKAKMRAQFM  540
QSKYGKSGSS NENKELKTEG GNKLSTSQAS ILPVVPKVPV RPNIEEPKKP VTLLLKERET  600
PNRLETSLAP KLRMDLKESI LEKCQRIQVP WNTPPEIKLD PEWRVGGGEN GKEIEVQRNR  660
NHREKETVYQ RVQEIPSNPK EPWDIEMDYD DSLTPEIPIE QPPDADGTET QASLSREVNN  720
AQAWVASSQG VNSAASLAPA LSQMNGASAA AEPDLELLAV LLKNPELVFA LTSGQAANLS  780
SEDTVKLLDM IKSGGAGNLN GLGRKMEERV EVSLPSPTPS SNPGTSGWRA DAGRNAFPQQ  840
MATTTNSLVS SAVHMIPSQR LSTSQAAVPS YSPDYFPPSM QTPAASEMAL TMKNTHLNNL  900
SNSYNVAERQ PNSFPQPLVS TPARQQRQPQ PLQQPRFSEP RLLTHMYPSK PQMGKPGPPP  960
SPSDSWRARQ DVPSNYHYLE NQNQYNASYG GPLQQPQLLP SPSWEGNEHV GGNQDFESWS  1020
PDNSPTRNPG YMYGREPRMN PARDYMPDRS RQMNPSGYRG QNRLGNRWPD RGRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein