PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000800.1_g710.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 382aa    MW: 41900.2 Da    PI: 6.8628
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000800.1_g710.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17265299135
                       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  Pav_sc0000800.1_g710.1.mk 265 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 299
                                99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MEAPEYFQNS FCPQFTPEKR HSFDNNNNKA TNGGGGGGGG DHFMVEDLLD FSNDDAVITD  60
GGATFDNVNG NSTDSSTLTV IDSCNSSSLS GSEPNVIPDI GSRNIAEGPF SSDLCVPYDD  120
LAELEWLSNF VEESFSSEDL QKLQLISGMK ARPDEAASET RQFQPEPNRN NNAHNTTTTT  180
NNNPIFNPDV SVPAKARSKR SRAAPCNWTS RLLLLSQPTS SSEQSDVVSG GPPPSTTGKK  240
TVKSALKKKE SPESPGGGPG EGRKCLHCAT DKTPQWRTGP MGPKTLCNAC GVRYKSGRLV  300
PEYRPASSPT FVLTKHSNSH RKVLELRRQK EMVRAQQQFI HQVPPQQHHH HHHHHQNMVF  360
DVSNGGDYLI HQHMGPDFRQ LI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.14e-82GATA family protein