PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000800.1_g1460.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 347aa MW: 37768.5 Da PI: 5.4241

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000800.1_g1460.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.8	7.3e-16	178	229	3	54
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++kr rr+ +NRe+ArrsR+RK+a+++ Le v++L +eN++L +l ++ Pav_sc0000800.1_g1460.1.mk 178 DIKRIRRMVSNRESARRSRRRKQAQLADLEFQVEQLRGENSTLYRQLTDASQ 229 68*****************************************955544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEQKHVAMCS AAHSQTTSSS LFAGAELKQS TSECSLSKAL EEFLGRSIIG QEAADTQSHR 60 DEKFCEFRAH PSDRNFDYAE GYYGDVWADD PSFGFKSRDI MTETLLCTQN ITPKNSSISA 120 TMDSQSSICV GSPTSAAKPI ARDNQARGAE SGSSGDQSDE DDFETEAGPC GDSTDPHDIK 180 RIRRMVSNRE SARRSRRRKQ AQLADLEFQV EQLRGENSTL YRQLTDASQQ FRDADTNNRV 240 LKSDVEALRA KVKLAEDMVA RGSITSSLNQ ILQGHLGTPQ QFNPHNLRGV AHVSPTVTIH 300 GDDARYAGMA VSGQNGGLGL VGNAGMANSN LSNRIMSDTV SCVSDTW

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEQKHVAMCS AAHSQTTSSS LFAGAELKQS TSECSLSKAL EEFLGRSIIG QEAADTQSHR  60
DEKFCEFRAH PSDRNFDYAE GYYGDVWADD PSFGFKSRDI MTETLLCTQN ITPKNSSISA  120
TMDSQSSICV GSPTSAAKPI ARDNQARGAE SGSSGDQSDE DDFETEAGPC GDSTDPHDIK  180
RIRRMVSNRE SARRSRRRKQ AQLADLEFQV EQLRGENSTL YRQLTDASQQ FRDADTNNRV  240
LKSDVEALRA KVKLAEDMVA RGSITSSLNQ ILQGHLGTPQ QFNPHNLRGV AHVSPTVTIH  300
GDDARYAGMA VSGQNGGLGL VGNAGMANSN LSNRIMSDTV SCVSDTW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	193	200	RRSRRRKQ
2	195	200	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	1e-62	bZIP family protein