PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000800.1_g1060.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 1203aa MW: 132169 Da PI: 8.7391

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000800.1_g1060.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.3	3.5e-14	264	302	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+CnCk+s+Clk+YCeCfaag +C+ C+C++C+N+ + Pav_sc0000800.1_g1060.1.mk 264 KQKQCNCKNSRCLKLYCECFAAGIYCEG-CNCSNCHNNVD 302 89***********************9.******986 PP
2	TCR	48.9	1.3e-15	348	387	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+C+ks ClkkYCeCf+a+ Cse+CkC +CkN e Pav_sc0000800.1_g1060.1.mk 348 KHNKGCHCRKSGCLKKYCECFQANILCSENCKCMGCKNFE 387 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 1203 aa Download sequence
MEQSETVSQI APKKLARQLD FTTVCRASAN AALPEVQLQL QLQSPSQAQL SQNSPAKSHV 60 HLQLQSPLPP PVPQSPKQLT PPPAIPQFPA RPSPAPAANA RIQHPGHKLS ISTLQSAIIF 120 HDFEHLLMEQ SETVSQIAPK KLARQLDFTT VCRASANAAL PEVQLQLQLQ SPSQAQLSQN 180 SPAKSHVHLQ LQSPLPPPVP QSPKQLTPPP AIPQFPARPS PAPAANARIQ HPVHKLSIST 240 LQTSKQESPI SRQRGDGKDA TPKKQKQCNC KNSRCLKLYC ECFAAGIYCE GCNCSNCHNN 300 VDNEAARQEA VGLILERNPN AFRPKIASSP QESRDGREDA GEIQAPGKHN KGCHCRKSGC 360 LKKYCECFQA NILCSENCKC MGCKNFEGSE ERRALHHEDH NTVAYMQQAN AAISGAIGSS 420 GYGTPLVSRK RKSYELYFGA TNQTTHPIKQ PQQENHLRPP MASSSLSSVP TCRTANAAVS 480 RSSKSTYRSP LADIIQSKNI KDLCSRLVVV SGAAAEALAG NRHRETIDKS STNLSTQEGK 540 EGKKEHDIQN SVHDDHLGVN EADRDESNYS GLNGGDVQNS RPMSPGTLAL MCDEQDKMFM 600 AAGLPNGVGS SSPSMTQKST QEIGCTEVYA EQERLVLTGF RDFLNHLITR GSIKETMCSP 660 QAKRERVSQK EPVQGGTAKP SPEPRCQKEA YSNGVAKSPV SANGKMLQPV TMLHPVATVT 720 SGDNDLSLKV VKKKHNPPCA NIIKPSPSKK ALIICIYYFI VPLCGKRIII MHRSLLNAHQ 780 PPMSFTLTSR NSNSPRTVLS HVAHTMAHTC PRSLPTSAPK LSYKYRSSSQ TRSVSDSTET 840 AMSPAMEEAL DDVQKLRDEF LKVLRSRRSG EVPLSVEPAK PVAHPLFQEA SPPTFSEAMN 900 ACPKANIPNF KDKLHEENLY LITEEGEQGR LPVWILSMKE NNTQKRPAVV FLHSTNKNKE 960 WLRPLLEAYA SRGYVAIAID SRYHGERASN ISTYRDALIS SWEKGDTMPF LFDTTWDLIK 1020 LADYLTTQRE DVDHSRIGIT GESLGGMHAW FAAAADTRYA VVVPIIGVQG FRWAIDNDKW 1080 QARVDSIKPV FEAAQIDLGK TSIDKEVVEK VWDRIAPGLA SKFDSPYTIP AIAPRPLLIV 1140 NGAEDPRCPL AGLEIPKSRA CKAYEDAQSM HNFKLIAEPG IGHQMTAFMV KEASYWLDQF 1200 LMP

Sequence ? help Back to Top

Protein Sequence Length: 1203 aa Download sequence

MEQSETVSQI APKKLARQLD FTTVCRASAN AALPEVQLQL QLQSPSQAQL SQNSPAKSHV  60
HLQLQSPLPP PVPQSPKQLT PPPAIPQFPA RPSPAPAANA RIQHPGHKLS ISTLQSAIIF  120
HDFEHLLMEQ SETVSQIAPK KLARQLDFTT VCRASANAAL PEVQLQLQLQ SPSQAQLSQN  180
SPAKSHVHLQ LQSPLPPPVP QSPKQLTPPP AIPQFPARPS PAPAANARIQ HPVHKLSIST  240
LQTSKQESPI SRQRGDGKDA TPKKQKQCNC KNSRCLKLYC ECFAAGIYCE GCNCSNCHNN  300
VDNEAARQEA VGLILERNPN AFRPKIASSP QESRDGREDA GEIQAPGKHN KGCHCRKSGC  360
LKKYCECFQA NILCSENCKC MGCKNFEGSE ERRALHHEDH NTVAYMQQAN AAISGAIGSS  420
GYGTPLVSRK RKSYELYFGA TNQTTHPIKQ PQQENHLRPP MASSSLSSVP TCRTANAAVS  480
RSSKSTYRSP LADIIQSKNI KDLCSRLVVV SGAAAEALAG NRHRETIDKS STNLSTQEGK  540
EGKKEHDIQN SVHDDHLGVN EADRDESNYS GLNGGDVQNS RPMSPGTLAL MCDEQDKMFM  600
AAGLPNGVGS SSPSMTQKST QEIGCTEVYA EQERLVLTGF RDFLNHLITR GSIKETMCSP  660
QAKRERVSQK EPVQGGTAKP SPEPRCQKEA YSNGVAKSPV SANGKMLQPV TMLHPVATVT  720
SGDNDLSLKV VKKKHNPPCA NIIKPSPSKK ALIICIYYFI VPLCGKRIII MHRSLLNAHQ  780
PPMSFTLTSR NSNSPRTVLS HVAHTMAHTC PRSLPTSAPK LSYKYRSSSQ TRSVSDSTET  840
AMSPAMEEAL DDVQKLRDEF LKVLRSRRSG EVPLSVEPAK PVAHPLFQEA SPPTFSEAMN  900
ACPKANIPNF KDKLHEENLY LITEEGEQGR LPVWILSMKE NNTQKRPAVV FLHSTNKNKE  960
WLRPLLEAYA SRGYVAIAID SRYHGERASN ISTYRDALIS SWEKGDTMPF LFDTTWDLIK  1020
LADYLTTQRE DVDHSRIGIT GESLGGMHAW FAAAADTRYA VVVPIIGVQG FRWAIDNDKW  1080
QARVDSIKPV FEAAQIDLGK TSIDKEVVEK VWDRIAPGLA SKFDSPYTIP AIAPRPLLIV  1140
NGAEDPRCPL AGLEIPKSRA CKAYEDAQSM HNFKLIAEPG IGHQMTAFMV KEASYWLDQF  1200
LMP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	428	433	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-123	CPP family protein