PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000766.1_g070.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 92aa    MW: 9876.99 Da    PI: 8.0522
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000766.1_g070.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.43.6e-332380259
                ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                               ++vrY eC+kNhAa +Gg+avDGC+Efm+s+geegt+aal+CaACgCHRnFHRreve+
  Pav_sc0000766.1_g070.1.mk 23 RSVRYGECQKNHAAGVGGYAVDGCREFMASNGEEGTTAALTCAACGCHRNFHRREVET 80
                               579****************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MRKRQVVVRR SEEGSATSSF TMRSVRYGEC QKNHAAGVGG YAVDGCREFM ASNGEEGTTA  60
ALTCAACGCH RNFHRREVET VCECPSPSAN GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.11e-29ZF-HD family protein