PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000766.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 347aa    MW: 38287.9 Da    PI: 7.4312
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000766.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer108.44e-3461117459
                ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                                v+YkeClkNhAa+lGgha+DGCgEfmps+++  +++++lkCaACgCHRnFHRr++e+
  Pav_sc0000766.1_g060.1.mk  61 VTYKECLKNHAATLGGHALDGCGEFMPSPTAIpTDPTSLKCAACGCHRNFHRRDPED 117
                                79****************************999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MELKPLRCSS DGYNPFHHHH HQQHHQHKIP GSRQRNPDPD PTREAFVLQQ RRPQAPQPVI  60
VTYKECLKNH AATLGGHALD GCGEFMPSPT AIPTDPTSLK CAACGCHRNF HRRDPEDPMP  120
PSAAAATTHV IEYQPHHRHH PPPPTHGGNR SPNSSSPPPI SSTYYPSAPH MLLALSTAHE  180
NALGGPNNNH SPQPPIVSPS PNARKRFRTK FSQEQKDKMY QFAERVGWKM QKRDEEIVQE  240
FCNEINVDKG VLKVWMHNNK NTFAKRDVIN GSGGGISRPN ILLEQAHNNG NGNGNGNGNN  300
NDDDENEEQN DDNNTNNNSD MQNLNHYQGT DGGAAGHVGT NGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.11e-61ZF-HD family protein