PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000754.1_g670.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 310aa MW: 34224.4 Da PI: 8.5437 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.4e-19 | 115 | 165 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p + r r++lg+++tae Aa a+++a+ kl+ge Pav_sc0000754.1_g670.1.mk 115 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 165 59******9.**********954...5**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MDTMQDSKLA FGFSATIDIR SSLSNLILTS NTNTLDSIFS HCPQALSTTP TTTSNNSSVS 60 EPLGSSVYLR QRDLLQKFCD ESRANATVSR FFQKNPVQSS ACSSTSYMAP CKKKLYRGVR 120 QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSKM 180 GFGDCARLNA VKTSVDAKIQ AICQKVKRER AKKNANKSSN SSENEKAVMK VDSSASGFGD 240 GSGQELVSFT ATPTATPTVS EDGVWRCENS PPSISTEWSM GIAEDSEFEG CSLARMPSYD 300 PELIWEVLAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 5e-47 | ERF family protein |