PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000744.1_g420.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 685aa MW: 74690.4 Da PI: 6.0665

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000744.1_g420.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.9	3.2e-31	255	312	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES-.-SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege.Hnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers d++++ei+Y+g Hnh Pav_sc0000744.1_g420.1.mk 255 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSF-DGQITEIIYKGApHNHA 312 7**************************************.********9669996 PP
2	WRKY	52.8	8.1e-17	439	478	20	59
S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 rsYY+CtsagC v+k+ver++++ k+v++tYeg+Hnhe Pav_sc0000744.1_g420.1.mk 439 KRRSYYKCTSAGCLVRKHVERASHNLKFVITTYEGKHNHE 478 569************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MGFLRTMDQE DDAVAENKTK GCGPGANTIS IAERRAAKCG FNAERINTAR FRTTSPLPSP 60 AAAARSPCLT IPPGISPTAL LDSPMMLPNS QALPSPTTGT FPLLPPNDDS SVLKSGTHED 120 GHRGSDFGSS FTFKRQGNPK YLPGYSSFEN QGSTVDYQSL VLEQQPIDFE FPMEFPEEAN 180 AKNYAVDPST HVKNLNSGIL NANCVDLQRS NSSAASEQNS LPKEPIHGED VGSHPFLEGE 240 HRGSYPSAGM VRTSEDGYNW RKYGQKQVKG SEYPRSYYKC THPNCQVKKK VERSFDGQIT 300 EIIYKGAPHN HAMPQPNRRA GASLGSSFSF DETSEMCEGS RASVKVEGGS VWTNIQTGKD 360 IKTGSDGRAE GLERTSSTSV VTDLSDPLST TQGKSMSIFE SAETPEFSST LASHDDDDRA 420 TQGSISLGDD ADDEESDSKR RSYYKCTSAG CLVRKHVERA SHNLKFVITT YEGKHNHEVP 480 AARNSNHINS NGGNAHPSTA NAQPALALPR SSNIPKPETQ VQDLAPHFDR KPEFHEEYLR 540 SSFLGNFNND LKFGVPSIYQ MKYPPLQNTM PYSSFGLHAN HGVTHQAGSV VPDFPISLPL 600 NLPPSGNLPL SGLDFNNGKP ICPVQPYFSG QQLQEDDIRY LKPKQEQNDD NLYDACLPII 660 DQANASLSSS SSSLLYQRIM GGYPS

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MGFLRTMDQE DDAVAENKTK GCGPGANTIS IAERRAAKCG FNAERINTAR FRTTSPLPSP  60
AAAARSPCLT IPPGISPTAL LDSPMMLPNS QALPSPTTGT FPLLPPNDDS SVLKSGTHED  120
GHRGSDFGSS FTFKRQGNPK YLPGYSSFEN QGSTVDYQSL VLEQQPIDFE FPMEFPEEAN  180
AKNYAVDPST HVKNLNSGIL NANCVDLQRS NSSAASEQNS LPKEPIHGED VGSHPFLEGE  240
HRGSYPSAGM VRTSEDGYNW RKYGQKQVKG SEYPRSYYKC THPNCQVKKK VERSFDGQIT  300
EIIYKGAPHN HAMPQPNRRA GASLGSSFSF DETSEMCEGS RASVKVEGGS VWTNIQTGKD  360
IKTGSDGRAE GLERTSSTSV VTDLSDPLST TQGKSMSIFE SAETPEFSST LASHDDDDRA  420
TQGSISLGDD ADDEESDSKR RSYYKCTSAG CLVRKHVERA SHNLKFVITT YEGKHNHEVP  480
AARNSNHINS NGGNAHPSTA NAQPALALPR SSNIPKPETQ VQDLAPHFDR KPEFHEEYLR  540
SSFLGNFNND LKFGVPSIYQ MKYPPLQNTM PYSSFGLHAN HGVTHQAGSV VPDFPISLPL  600
NLPPSGNLPL SGLDFNNGKP ICPVQPYFSG QQLQEDDIRY LKPKQEQNDD NLYDACLPII  660
DQANASLSSS SSSLLYQRIM GGYPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-57	WRKY family protein