PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000709.1_g130.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 896aa MW: 98452.2 Da PI: 6.974

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000709.1_g130.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.3	4.1e-15	510	548	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnC++skClk+YCeCfaag++C ++C C +C Nk e Pav_sc0000709.1_g130.1.mk 510 CKRCNCRRSKCLKLYCECFAAGVYCVDSCACVNCYNKPE 548 89**********************************975 PP
2	TCR	31.8	2.9e-10	596	618	1	23
TCR 1 kekkgCnCkkskClkkYCeCfaa 23 ++k+gCnCkkskClk+YCeCf+ Pav_sc0000709.1_g130.1.mk 596 RHKRGCNCKKSKCLKRYCECFQV 618 589******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 896 aa Download sequence
MDRTPETKRI AATTSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP 60 VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY 120 LADPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTE VCDIMFGSPE NEAVLLSDQA 180 EKDLPLSSLE MSQAAINQKG GKKTEELSRF IFEKVKESDV NACLVSRAQN CGENAAKLQR 240 AGCQYDEKNA SSQSRHSNEH KKRVQKGLVK EGGQNERGIC RHLQFEAAKA YKFTILGNSE 300 SPCSLTHDAT NSRSPSILTN LKSLASSHFD NRASSSPQDV SCDTSQFPSS PYESFTSAQI 360 GVNSTTSAPI HSGIGLHLNR ISRSTSLSSD ICSSKKSTGY LRMPEQMLEH GSNNIATNSS 420 SILTSAVPGK IYVHVASGQQ ESQAVTEASS FTFHSTDTMK PPCHSMLVDQ EAALCEVGMS 480 TSQEADEVEE LNQLSPKRKR RKDAYMSEGC KRCNCRRSKC LKLYCECFAA GVYCVDSCAC 540 VNCYNKPEFE DTVLDIRQQI EARNPLAFTP KVVDNAIDSS PNFTEEQDLT TPSSARHKRG 600 CNCKKSKCLK RYCECFQVYM YIYSFHFSIS TACDIRKMVF LQEFWKLVSI DMSLTYLDLT 660 SLFFFCSFPK AKVGCSSACR CEGCKNTFGV TPEPIYNRAK RWEAHPSENL DNVKGAIACI 720 KAPGINHYSP TWEGISDISK LTPLSHPCSR TAFSSASSSN SAKIPQAQLP SSQLQPSGTG 780 HFHWGCSAVI VTPELSEGQG PHDLNSDGAG AHYHIPYDDT PEILKETSNP TKVVKASSPN 840 QKRVSPPQSR SRLRERSPTG LRSGRKFILQ AMPSFPPLTP HRNSKEGTNE IENDDK

Sequence ? help Back to Top

Protein Sequence Length: 896 aa Download sequence

MDRTPETKRI AATTSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP  60
VVFTSPHINL QRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEEVQL CSPSGCVDEY  120
LADPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTE VCDIMFGSPE NEAVLLSDQA  180
EKDLPLSSLE MSQAAINQKG GKKTEELSRF IFEKVKESDV NACLVSRAQN CGENAAKLQR  240
AGCQYDEKNA SSQSRHSNEH KKRVQKGLVK EGGQNERGIC RHLQFEAAKA YKFTILGNSE  300
SPCSLTHDAT NSRSPSILTN LKSLASSHFD NRASSSPQDV SCDTSQFPSS PYESFTSAQI  360
GVNSTTSAPI HSGIGLHLNR ISRSTSLSSD ICSSKKSTGY LRMPEQMLEH GSNNIATNSS  420
SILTSAVPGK IYVHVASGQQ ESQAVTEASS FTFHSTDTMK PPCHSMLVDQ EAALCEVGMS  480
TSQEADEVEE LNQLSPKRKR RKDAYMSEGC KRCNCRRSKC LKLYCECFAA GVYCVDSCAC  540
VNCYNKPEFE DTVLDIRQQI EARNPLAFTP KVVDNAIDSS PNFTEEQDLT TPSSARHKRG  600
CNCKKSKCLK RYCECFQVYM YIYSFHFSIS TACDIRKMVF LQEFWKLVSI DMSLTYLDLT  660
SLFFFCSFPK AKVGCSSACR CEGCKNTFGV TPEPIYNRAK RWEAHPSENL DNVKGAIACI  720
KAPGINHYSP TWEGISDISK LTPLSHPCSR TAFSSASSSN SAKIPQAQLP SSQLQPSGTG  780
HFHWGCSAVI VTPELSEGQG PHDLNSDGAG AHYHIPYDDT PEILKETSNP TKVVKASSPN  840
QKRVSPPQSR SRLRERSPTG LRSGRKFILQ AMPSFPPLTP HRNSKEGTNE IENDDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	497	502	KRKRRK
2	498	503	RKRRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-51	CPP family protein