PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000679.1_g290.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C3H
Protein Properties Length: 95aa    MW: 10466 Da    PI: 8.6346
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000679.1_g290.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH29.21.6e-092181127
                               GTS--TTTTT-SS-SSS CS
                    zf-CCCH 11 rtGtCkyGdrCkFaHgp 27
                               +tG+Ck+G++CkF+H++
  Pav_sc0000679.1_g290.1.br  2 KTGQCKFGATCKFHHPK 18
                               9**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
LKTGQCKFGA TCKFHHPKDI LIPSAEQENT IGETGTTIQP EGTGLSVKPP VSFSPALSFN  60
YKELPVRPGE PDCPFYFYLI GSCKYGATWA RLKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.17e-26C3H family protein